Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 LINC00857-201ENST00000422847 2161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4Q9NQC3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AP001267.2-201ENST00000532619 2086 ntBASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AC005412.3-201ENST00000580309 715 ntBASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AC106872.6-201ENST00000514228 1346 ntBASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4Q9NQC3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 AC114271.1-201ENST00000612689 2813 ntBASIC18.12■□□□□ 0.49
RTN4Q9NQC3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 AC021087.4-201ENST00000563761 564 ntBASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 AC020765.3-201ENST00000613051 740 ntBASIC18.12■□□□□ 0.49
RTN4Q9NQC3 AP001350.2-201ENST00000625104 1094 ntBASIC18.12■□□□□ 0.49
RTN4Q9NQC3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RTN4Q9NQC3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms