RNA–Protein interactions for RNA: ENST00000422847.1

LINC00857-201, long intergenic non-protein coding RNA 857, humanhuman

TSL 1 (best) BASIC

Gene LINC00857, Length 2,161 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00857-201ENST00000422847 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
LINC00857-201ENST00000422847 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
LINC00857-201ENST00000422847 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
LINC00857-201ENST00000422847 ABCC9O60706 1549 aa20.25■□□□□ 0.83
LINC00857-201ENST00000422847 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
LINC00857-201ENST00000422847 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
LINC00857-201ENST00000422847 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
LINC00857-201ENST00000422847 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
LINC00857-201ENST00000422847 NACADO15069 1562 aa19.52■□□□□ 0.72
LINC00857-201ENST00000422847 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
LINC00857-201ENST00000422847 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
LINC00857-201ENST00000422847 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
LINC00857-201ENST00000422847 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
LINC00857-201ENST00000422847 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
LINC00857-201ENST00000422847 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
LINC00857-201ENST00000422847 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
LINC00857-201ENST00000422847 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
LINC00857-201ENST00000422847 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
LINC00857-201ENST00000422847 HRCP23327 699 aa18.91■□□□□ 0.62
LINC00857-201ENST00000422847 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
LINC00857-201ENST00000422847 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
LINC00857-201ENST00000422847 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
LINC00857-201ENST00000422847 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
LINC00857-201ENST00000422847 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
LINC00857-201ENST00000422847 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.53
LINC00857-201ENST00000422847 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
LINC00857-201ENST00000422847 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
LINC00857-201ENST00000422847 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
LINC00857-201ENST00000422847 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
LINC00857-201ENST00000422847 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
LINC00857-201ENST00000422847 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LINC00857-201ENST00000422847 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
LINC00857-201ENST00000422847 WIZO95785 1651 aa18.18■□□□□ 0.5
LINC00857-201ENST00000422847 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
LINC00857-201ENST00000422847 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
LINC00857-201ENST00000422847 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
LINC00857-201ENST00000422847 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
LINC00857-201ENST00000422847 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
LINC00857-201ENST00000422847 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
LINC00857-201ENST00000422847 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
LINC00857-201ENST00000422847 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
LINC00857-201ENST00000422847 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
LINC00857-201ENST00000422847 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
LINC00857-201ENST00000422847 ZEB1P37275 1124 aaPredicted RBP17.97■□□□□ 0.47
LINC00857-201ENST00000422847 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
LINC00857-201ENST00000422847 KCNA4P22459 653 aa17.93■□□□□ 0.46
LINC00857-201ENST00000422847 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
LINC00857-201ENST00000422847 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
LINC00857-201ENST00000422847 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
LINC00857-201ENST00000422847 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
LINC00857-201ENST00000422847 NESP48681 1621 aa17.63■□□□□ 0.41
LINC00857-201ENST00000422847 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
LINC00857-201ENST00000422847 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
LINC00857-201ENST00000422847 CFTRP13569 1480 aa17.52■□□□□ 0.39
LINC00857-201ENST00000422847 TRIM41Q8WV44 630 aa17.52■□□□□ 0.39
LINC00857-201ENST00000422847 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
LINC00857-201ENST00000422847 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
LINC00857-201ENST00000422847 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
LINC00857-201ENST00000422847 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
LINC00857-201ENST00000422847 MYT1Q01538 1121 aa17.39■□□□□ 0.37
LINC00857-201ENST00000422847 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
LINC00857-201ENST00000422847 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
LINC00857-201ENST00000422847 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
LINC00857-201ENST00000422847 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.37
LINC00857-201ENST00000422847 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
LINC00857-201ENST00000422847 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
LINC00857-201ENST00000422847 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
LINC00857-201ENST00000422847 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
LINC00857-201ENST00000422847 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
LINC00857-201ENST00000422847 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
LINC00857-201ENST00000422847 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
LINC00857-201ENST00000422847 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
LINC00857-201ENST00000422847 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
LINC00857-201ENST00000422847 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
LINC00857-201ENST00000422847 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
LINC00857-201ENST00000422847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
LINC00857-201ENST00000422847 CUX1P39880 1505 aa17.16■□□□□ 0.34
LINC00857-201ENST00000422847 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
LINC00857-201ENST00000422847 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
LINC00857-201ENST00000422847 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
LINC00857-201ENST00000422847 TOPBP1Q92547 1522 aa17.14■□□□□ 0.34
LINC00857-201ENST00000422847 WDR62O43379 1518 aa17.12■□□□□ 0.33
LINC00857-201ENST00000422847 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
LINC00857-201ENST00000422847 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
LINC00857-201ENST00000422847 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
LINC00857-201ENST00000422847 BIVM-ERCC5R4GMW8 1640 aa17.05■□□□□ 0.32
LINC00857-201ENST00000422847 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
LINC00857-201ENST00000422847 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
LINC00857-201ENST00000422847 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
LINC00857-201ENST00000422847 CUX2O14529 1486 aa17■□□□□ 0.31
LINC00857-201ENST00000422847 SOGA1O94964 1423 aa16.96■□□□□ 0.31
LINC00857-201ENST00000422847 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
LINC00857-201ENST00000422847 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
LINC00857-201ENST00000422847 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
LINC00857-201ENST00000422847 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
LINC00857-201ENST00000422847 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
LINC00857-201ENST00000422847 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
LINC00857-201ENST00000422847 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
LINC00857-201ENST00000422847 ADRA2BP18089 450 aa16.87■□□□□ 0.29
LINC00857-201ENST00000422847 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms