Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRC28Q86X40 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.58□□□□□ -0.23
LRRC28Q86X40 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.58□□□□□ -0.23
LRRC28Q86X40 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
LRRC28Q86X40 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRC28Q86X40 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 HLA-V-204ENST00000476601 1289 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AC093214.1-201ENST00000511688 1107 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 IGHV3-42-201ENST00000520410 361 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 AC027369.6-201ENST00000525520 931 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 SPCS2P1-201ENST00000561636 679 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AL096865.1-201ENST00000606796 927 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 AC073592.8-201ENST00000624126 511 ntBASIC13.58□□□□□ -0.24
LRRC28Q86X40 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRC28Q86X40 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LRRC28Q86X40 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC092580.3-201ENST00000430932 139 ntBASIC13.57□□□□□ -0.24
LRRC28Q86X40 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 MTND6P24-201ENST00000440466 518 ntBASIC13.57□□□□□ -0.24
LRRC28Q86X40 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AL450472.2-201ENST00000603663 1156 ntBASIC13.57□□□□□ -0.24
LRRC28Q86X40 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 AC011474.4-201ENST00000623523 2076 ntBASIC13.57□□□□□ -0.24
LRRC28Q86X40 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LRRC28Q86X40 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRC28Q86X40 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms