Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TUBA1AQ71U36 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AC069120.2-201ENST00000524091 540 ntBASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AC140878.1-201ENST00000565277 250 ntBASIC14.11□□□□□ -0.15
TUBA1AQ71U36 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AL589739.1-201ENST00000607720 493 ntBASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AL390754.1-201ENST00000619088 582 ntBASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TUBA1AQ71U36 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AC093214.1-201ENST00000511688 1107 ntBASIC14.1□□□□□ -0.15
TUBA1AQ71U36 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TUBA1AQ71U36 AC015911.4-201ENST00000588022 1070 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms