Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 YBX2P1-201ENST00000394192 760 ntBASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 AC023274.1-201ENST00000418278 595 ntBASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 MIR6069-201ENST00000620069 79 ntBASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AL035456.1-201ENST00000456064 1369 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC015922.1-201ENST00000421102 1152 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 KRT18P43-201ENST00000469825 1281 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC022447.6-201ENST00000515522 438 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 SAMD11P1-201ENST00000571429 661 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 AC023090.2-201ENST00000625182 2110 ntBASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00242Q5T6M2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00242Q5T6M2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.4□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms