Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.42□□□□□ -0.1
MMP11P24347 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
MMP11P24347 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.42□□□□□ -0.1
MMP11P24347 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.42□□□□□ -0.1
MMP11P24347 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.42□□□□□ -0.1
MMP11P24347 AL583810.1-201ENST00000553344 1045 ntBASIC14.42□□□□□ -0.1
MMP11P24347 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.42□□□□□ -0.1
MMP11P24347 AC025279.2-201ENST00000569730 653 ntBASIC14.42□□□□□ -0.1
MMP11P24347 AC244669.2-201ENST00000612320 853 ntBASIC14.42□□□□□ -0.1
MMP11P24347 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MMP11P24347 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
MMP11P24347 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
MMP11P24347 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.42□□□□□ -0.1
MMP11P24347 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MMP11P24347 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 KRT8P35-201ENST00000483942 1338 ntBASIC14.41□□□□□ -0.1
MMP11P24347 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 REXO1L6P-201ENST00000603433 1515 ntBASIC14.41□□□□□ -0.1
MMP11P24347 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.41□□□□□ -0.1
MMP11P24347 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 CNN2P8-201ENST00000421872 913 ntBASIC14.41□□□□□ -0.1
MMP11P24347 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 AC114812.1-204ENST00000449669 728 ntBASIC14.41□□□□□ -0.1
MMP11P24347 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MMP11P24347 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MMP11P24347 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
MMP11P24347 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 SNX18-202ENST00000343017 3140 ntBASIC14.41□□□□□ -0.1
MMP11P24347 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MMP11P24347 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP11P24347 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms