Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
UPK1BO75841 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
UPK1BO75841 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UPK1BO75841 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK1BO75841 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 KRT8P37-201ENST00000451609 1420 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK1BO75841 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.22□□□□□ -0.29
UPK1BO75841 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 ELK2BP-201ENST00000415014 1224 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 GCSHP5-201ENST00000443090 522 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK1BO75841 KRT17P6-201ENST00000453795 1220 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 KRT18P31-201ENST00000506277 1292 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.22□□□□□ -0.29
UPK1BO75841 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 AL078644.1-201ENST00000609881 752 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 AL139288.1-201ENST00000623748 933 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UPK1BO75841 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 AC006504.4-201ENST00000592118 1568 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 AL607033.1-201ENST00000623900 1599 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
UPK1BO75841 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
UPK1BO75841 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 AGAP10P-201ENST00000454844 2418 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 AC090643.2-201ENST00000623442 2029 ntBASIC13.22□□□□□ -0.29
UPK1BO75841 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK1BO75841 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UPK1BO75841 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
UPK1BO75841 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
UPK1BO75841 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UPK1BO75841 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UPK1BO75841 MIR718-201ENST00000390190 70 ntBASIC13.21□□□□□ -0.29
UPK1BO75841 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 RPS8P6-201ENST00000426177 609 ntBASIC13.21□□□□□ -0.29
UPK1BO75841 TSPY5P-201ENST00000426936 936 ntBASIC13.21□□□□□ -0.29
UPK1BO75841 AC117947.1-201ENST00000427448 529 ntBASIC13.21□□□□□ -0.29
UPK1BO75841 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UPK1BO75841 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.21□□□□□ -0.29
UPK1BO75841 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UPK1BO75841 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms