Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.44□□□□□ -0.42
SSSCA1O60232 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AC074386.1-202ENST00000463561 864 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 UNC93B7-201ENST00000509439 705 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AL135744.1-201ENST00000565098 629 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AL445228.2-201ENST00000605589 952 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AL731571.1-201ENST00000617058 5428 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SSSCA1O60232 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.44□□□□□ -0.42
SSSCA1O60232 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.44□□□□□ -0.42
SSSCA1O60232 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SSSCA1O60232 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 AKAP8P1-201ENST00000434743 1349 ntBASIC12.43□□□□□ -0.42
SSSCA1O60232 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 AL031284.1-201ENST00000419297 478 ntBASIC12.43□□□□□ -0.42
SSSCA1O60232 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.43□□□□□ -0.42
SSSCA1O60232 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.43□□□□□ -0.42
SSSCA1O60232 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.43□□□□□ -0.42
SSSCA1O60232 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.43□□□□□ -0.42
SSSCA1O60232 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.43□□□□□ -0.42
SSSCA1O60232 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSSCA1O60232 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.43□□□□□ -0.42
SSSCA1O60232 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSSCA1O60232 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms