Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 BX539320.1-201ENST00000623759 877 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 LINC02228-204ENST00000642115 2962 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC073347.1-201ENST00000421633 2643 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC020658.6-201ENST00000623564 1870 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ACA64.2-201ENST00000459014 129 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 USP32P1-208ENST00000506594 1164 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AP001063.1-201ENST00000568332 529 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC233724.13-201ENST00000598383 410 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC017083.2-201ENST00000608069 979 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 SSR4P1-203ENST00000599569 2260 ntBASIC12.54□□□□□ -0.4
A0A1W2PRF3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.54□□□□□ -0.4
A0A1W2PRF3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
A0A1W2PRF3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
A0A1W2PRF3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.53□□□□□ -0.4
A0A1W2PRF3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
A0A1W2PRF3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
A0A1W2PRF3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms