Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AC092135.3-201ENST00000624151 1846 ntBASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 BASP1P1-201ENST00000430708 665 ntBASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AL512638.1-201ENST00000457493 794 ntBASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 BX539320.1-201ENST00000623759 877 ntBASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AC005252.2-201ENST00000624630 1141 ntBASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RSPO3Q9BXY4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 AC134915.1-201ENST00000426461 574 ntBASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CYMP-203ENST00000474680 1263 ntBASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 AC007431.3-201ENST00000623221 587 ntBASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms