Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 MIR658-201ENST00000385210 100 ntBASIC15.65■□□□□ 0.1
RPRD1AQ96P16 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 KRT90P-201ENST00000549264 1064 ntBASIC15.65■□□□□ 0.1
RPRD1AQ96P16 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 MIR6775-201ENST00000617557 69 ntBASIC15.65■□□□□ 0.1
RPRD1AQ96P16 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPRD1AQ96P16 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RPRD1AQ96P16 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC144831.1-201ENST00000573312 2656 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 LILRP1-201ENST00000444199 1370 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 ANKRD19P-201ENST00000338192 862 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 RPL7P3-201ENST00000441388 714 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC132938.4-201ENST00000623835 848 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AL603764.1-201ENST00000636452 321 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 AC104640.1-201ENST00000562617 2109 ntBASIC15.64■□□□□ 0.09
RPRD1AQ96P16 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.64■□□□□ 0.09
RPRD1AQ96P16 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPRD1AQ96P16 TPM3P8-201ENST00000330554 643 ntBASIC15.63■□□□□ 0.09
RPRD1AQ96P16 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms