Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AC016397.2-201ENST00000624848 1985 ntBASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 MED15P5-201ENST00000423150 992 ntBASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 RHOQP3-201ENST00000437982 621 ntBASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 RNA5SP416-201ENST00000516838 111 ntBASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AC145285.3-201ENST00000564603 959 ntBASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 AC012508.2-201ENST00000567613 1472 ntBASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 MIR940-201ENST00000401276 94 ntBASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHMP6Q96FZ7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms