Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB3BP20337 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
RAB3BP20337 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB3BP20337 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB3BP20337 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB3BP20337 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB3BP20337 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 MIR346-201ENST00000362234 95 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB3BP20337 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 AC104457.1-201ENST00000401024 814 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 FO393414.2-201ENST00000405153 598 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 AL355306.1-201ENST00000415580 579 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 AL671277.1-201ENST00000429656 993 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB3BP20337 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 AP000842.3-202ENST00000569238 1080 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 Z83851.2-201ENST00000609564 659 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB3BP20337 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB3BP20337 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 CICP8-201ENST00000455800 2813 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 AC023090.2-201ENST00000625182 2110 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.37□□□□□ -0.27
RAB3BP20337 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB3BP20337 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB3BP20337 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB3BP20337 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 AL031595.1-201ENST00000623969 4709 ntBASIC13.36□□□□□ -0.27
RAB3BP20337 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RAB3BP20337 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms