Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 AC011474.4-201ENST00000623523 2076 ntBASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV18A0A075B6X5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AP3S2-216ENST00000617003 1561 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 FAM86C2P-203ENST00000528684 1004 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AP001005.1-201ENST00000571755 1248 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AL691432.3-201ENST00000621860 400 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 AC089987.1-201ENST00000551654 2209 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 CICP17-201ENST00000418553 2377 ntBASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV18A0A075B6X5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 IGHV3-62-201ENST00000520057 340 ntBASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms