Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 AC011474.4-201ENST00000623523 2076 ntBASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCM2LQ9NUG4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 GPS2P2-201ENST00000430745 888 ntBASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 AL135744.1-201ENST00000565098 629 ntBASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCM2LQ9NUG4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 CRB3P1-201ENST00000449338 276 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 IGHV3-62-201ENST00000520057 340 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RARRES2P8-201ENST00000566335 367 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC138969.3-201ENST00000546612 1459 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC138932.2-201ENST00000548268 1459 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AC126755.4-201ENST00000549796 1459 ntBASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCM2LQ9NUG4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms