Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 RBM17P3-201ENST00000417687 1192 ntBASIC12.38□□□□□ -0.43
NKX6-2Q9C056 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 KRT18P57-201ENST00000443599 1254 ntBASIC12.38□□□□□ -0.43
NKX6-2Q9C056 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 AL591684.3-201ENST00000605187 298 ntBASIC12.38□□□□□ -0.43
NKX6-2Q9C056 AL121956.5-201ENST00000625261 221 ntBASIC12.38□□□□□ -0.43
NKX6-2Q9C056 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 MEX3B-202ENST00000558133 4333 ntBASIC12.38□□□□□ -0.43
NKX6-2Q9C056 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX6-2Q9C056 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 AP002761.4-201ENST00000565433 3361 ntBASIC12.37□□□□□ -0.43
NKX6-2Q9C056 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 LINC00265-3P-201ENST00000447588 903 ntBASIC12.37□□□□□ -0.43
NKX6-2Q9C056 KRT16P4-201ENST00000453883 522 ntBASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 AC106795.1-205ENST00000512851 1056 ntBASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX6-2Q9C056 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX6-2Q9C056 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NKX6-2Q9C056 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX6-2Q9C056 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms