Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.43□□□□□ -0.26
CX3CR1P49238 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AC092337.1-201ENST00000568699 1129 ntBASIC13.43□□□□□ -0.26
CX3CR1P49238 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AC139530.3-201ENST00000620344 690 ntBASIC13.43□□□□□ -0.26
CX3CR1P49238 AL158212.4-201ENST00000624062 1286 ntBASIC13.43□□□□□ -0.26
CX3CR1P49238 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CX3CR1P49238 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
CX3CR1P49238 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CX3CR1P49238 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CX3CR1P49238 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC104457.1-201ENST00000401024 814 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.42□□□□□ -0.26
CX3CR1P49238 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 TSSK5P-201ENST00000423978 907 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC009477.1-201ENST00000452936 217 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 MEIS3P1-201ENST00000495167 958 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.42□□□□□ -0.26
CX3CR1P49238 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CX3CR1P49238 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
CX3CR1P49238 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 AC139749.1-202ENST00000617529 3139 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.42□□□□□ -0.26
CX3CR1P49238 BTBD7P1-201ENST00000447253 1453 ntBASIC13.42□□□□□ -0.26
CX3CR1P49238 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CX3CR1P49238 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CX3CR1P49238 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 CICP14-201ENST00000629111 2732 ntBASIC13.41□□□□□ -0.26
CX3CR1P49238 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms