Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC007787.1-201ENST00000588095 1583 ntBASIC14.82□□□□□ -0.04
KRT6CP48668 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
KRT6CP48668 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6CP48668 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6CP48668 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6CP48668 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 MEIS3P1-201ENST00000495167 958 ntBASIC14.82□□□□□ -0.04
KRT6CP48668 AC004066.1-201ENST00000502488 802 ntBASIC14.82□□□□□ -0.04
KRT6CP48668 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6CP48668 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
KRT6CP48668 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.82□□□□□ -0.04
KRT6CP48668 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 AC023511.2-201ENST00000618803 211 ntBASIC14.82□□□□□ -0.04
KRT6CP48668 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.82□□□□□ -0.04
KRT6CP48668 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
KRT6CP48668 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6CP48668 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6CP48668 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6CP48668 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.81□□□□□ -0.04
KRT6CP48668 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
KRT6CP48668 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6CP48668 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.81□□□□□ -0.04
KRT6CP48668 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.81□□□□□ -0.04
KRT6CP48668 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6CP48668 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6CP48668 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 LINC00552-201ENST00000625151 2579 ntBASIC14.81□□□□□ -0.04
KRT6CP48668 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KRT6CP48668 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6CP48668 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms