Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.69■□□□□ 0.26
USP8P40818 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.69■□□□□ 0.26
USP8P40818 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.69■□□□□ 0.26
USP8P40818 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP8P40818 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.68■□□□□ 0.26
USP8P40818 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 AL133267.1-201ENST00000398220 340 ntBASIC16.68■□□□□ 0.26
USP8P40818 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
USP8P40818 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.68■□□□□ 0.26
USP8P40818 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.68■□□□□ 0.26
USP8P40818 KRT18P43-201ENST00000469825 1281 ntBASIC16.68■□□□□ 0.26
USP8P40818 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 AC009407.1-201ENST00000568958 598 ntBASIC16.68■□□□□ 0.26
USP8P40818 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.68■□□□□ 0.26
USP8P40818 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.68■□□□□ 0.26
USP8P40818 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 CICP24-201ENST00000605464 2705 ntBASIC16.68■□□□□ 0.26
USP8P40818 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP8P40818 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP8P40818 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
USP8P40818 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 LINC01101-201ENST00000622953 1884 ntBASIC16.67■□□□□ 0.26
USP8P40818 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 TOMM22P5-201ENST00000416399 439 ntBASIC16.67■□□□□ 0.26
USP8P40818 PMS2P2-201ENST00000425039 1128 ntBASIC16.67■□□□□ 0.26
USP8P40818 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.67■□□□□ 0.26
USP8P40818 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.67■□□□□ 0.26
USP8P40818 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.67■□□□□ 0.26
USP8P40818 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
USP8P40818 AC135586.1-201ENST00000539323 574 ntBASIC16.67■□□□□ 0.26
USP8P40818 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.67■□□□□ 0.26
USP8P40818 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.67■□□□□ 0.26
USP8P40818 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
USP8P40818 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.67■□□□□ 0.26
USP8P40818 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP8P40818 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms