Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NTF3P20783 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NTF3P20783 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.67□□□□□ -0.54
NTF3P20783 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 KRT18P27-201ENST00000427733 1299 ntBASIC11.66□□□□□ -0.54
NTF3P20783 GPX1P2-201ENST00000429271 606 ntBASIC11.66□□□□□ -0.54
NTF3P20783 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.66□□□□□ -0.54
NTF3P20783 KRT18P31-201ENST00000506277 1292 ntBASIC11.66□□□□□ -0.54
NTF3P20783 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 ACTL9-202ENST00000612068 1252 ntBASIC11.66□□□□□ -0.54
NTF3P20783 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.66□□□□□ -0.54
NTF3P20783 AP000550.4-202ENST00000639755 178 ntBASIC11.66□□□□□ -0.54
NTF3P20783 AL645728.2-201ENST00000641974 660 ntBASIC11.66□□□□□ -0.54
NTF3P20783 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NTF3P20783 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.66□□□□□ -0.54
NTF3P20783 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
NTF3P20783 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NTF3P20783 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.66□□□□□ -0.54
NTF3P20783 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 PTPRVP-205ENST00000641549 5067 ntBASIC11.65□□□□□ -0.54
NTF3P20783 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NTF3P20783 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.65□□□□□ -0.54
NTF3P20783 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.65□□□□□ -0.54
NTF3P20783 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 MST1P2-201ENST00000457982 2291 ntBASIC11.65□□□□□ -0.54
NTF3P20783 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.65□□□□□ -0.54
NTF3P20783 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NTF3P20783 AC011474.4-201ENST00000623523 2076 ntBASIC11.65□□□□□ -0.54
NTF3P20783 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.65□□□□□ -0.54
NTF3P20783 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NTF3P20783 AL645939.2-201ENST00000427340 991 ntBASIC11.65□□□□□ -0.54
NTF3P20783 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms