Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.36■□□□□ 0.21
CD58P19256 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CD58P19256 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.36■□□□□ 0.21
CD58P19256 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.36■□□□□ 0.21
CD58P19256 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD58P19256 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 COX5BP8-201ENST00000416911 349 ntBASIC16.35■□□□□ 0.21
CD58P19256 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 AC093433.1-201ENST00000458048 571 ntBASIC16.35■□□□□ 0.21
CD58P19256 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.35■□□□□ 0.21
CD58P19256 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.35■□□□□ 0.21
CD58P19256 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.35■□□□□ 0.21
CD58P19256 TDH-203ENST00000531764 1110 ntBASIC16.35■□□□□ 0.21
CD58P19256 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CD58P19256 AC012645.4-201ENST00000610691 1061 ntBASIC16.35■□□□□ 0.21
CD58P19256 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 AL360270.3-201ENST00000609118 1348 ntBASIC16.35■□□□□ 0.21
CD58P19256 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.35■□□□□ 0.21
CD58P19256 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CD58P19256 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 ZBED1P1-201ENST00000502364 1930 ntBASIC16.35■□□□□ 0.21
CD58P19256 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.35■□□□□ 0.21
CD58P19256 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD58P19256 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 AC106881.1-201ENST00000605849 3329 ntBASIC16.34■□□□□ 0.21
CD58P19256 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CD58P19256 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
CD58P19256 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 AL512384.1-201ENST00000406683 331 ntBASIC16.34■□□□□ 0.21
CD58P19256 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
CD58P19256 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.34■□□□□ 0.21
CD58P19256 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.34■□□□□ 0.21
CD58P19256 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.34■□□□□ 0.21
CD58P19256 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 AC005225.4-201ENST00000557330 545 ntBASIC16.34■□□□□ 0.21
CD58P19256 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CD58P19256 AP001063.1-201ENST00000568332 529 ntBASIC16.34■□□□□ 0.21
CD58P19256 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.34■□□□□ 0.21
CD58P19256 IGHV3-72-202ENST00000621503 303 ntBASIC16.34■□□□□ 0.21
CD58P19256 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CD58P19256 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.34■□□□□ 0.21
CD58P19256 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD58P19256 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.34■□□□□ 0.21
CD58P19256 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.34■□□□□ 0.21
CD58P19256 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms