Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.92□□□□□ -0.18
HTR1AP08908 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 AP002472.1-201ENST00000577490 586 ntBASIC13.92□□□□□ -0.18
HTR1AP08908 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 AC104692.2-201ENST00000603054 253 ntBASIC13.92□□□□□ -0.18
HTR1AP08908 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 AL591122.2-201ENST00000624125 1853 ntBASIC13.92□□□□□ -0.18
HTR1AP08908 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.92□□□□□ -0.18
HTR1AP08908 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.92□□□□□ -0.18
HTR1AP08908 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HTR1AP08908 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR1AP08908 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR1AP08908 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 RNA5SP419-201ENST00000515908 135 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR1AP08908 AL662844.1-201ENST00000546340 181 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 PDPK2P-202ENST00000562415 1191 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 AC027307.2-201ENST00000591252 911 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR1AP08908 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR1AP08908 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
HTR1AP08908 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 AC012508.2-201ENST00000567613 1472 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 AC007787.1-201ENST00000588095 1583 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR1AP08908 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HTR1AP08908 AL354702.1-201ENST00000442006 1960 ntBASIC13.91□□□□□ -0.18
HTR1AP08908 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 CR383656.2-201ENST00000548656 2254 ntBASIC13.9□□□□□ -0.18
HTR1AP08908 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR1AP08908 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR1AP08908 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR1AP08908 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms