Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 AL627231.1-201ENST00000394467 1125 ntBASIC19.61■□□□□ 0.73
LTN1O94822 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 AC079112.1-201ENST00000454972 939 ntBASIC19.61■□□□□ 0.73
LTN1O94822 CHCHD2P9-201ENST00000461726 456 ntBASIC19.61■□□□□ 0.73
LTN1O94822 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.61■□□□□ 0.73
LTN1O94822 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC19.61■□□□□ 0.73
LTN1O94822 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LTN1O94822 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LTN1O94822 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LTN1O94822 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 AL807761.2-201ENST00000422849 729 ntBASIC19.6■□□□□ 0.73
LTN1O94822 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 AC092580.1-201ENST00000433998 658 ntBASIC19.6■□□□□ 0.73
LTN1O94822 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 AC005041.3-201ENST00000606287 649 ntBASIC19.6■□□□□ 0.73
LTN1O94822 MIR6842-201ENST00000612539 65 ntBASIC19.6■□□□□ 0.73
LTN1O94822 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 CICP23-201ENST00000605013 2741 ntBASIC19.6■□□□□ 0.73
LTN1O94822 AC007950.2-201ENST00000615045 2347 ntBASIC19.6■□□□□ 0.73
LTN1O94822 ACE3P-201ENST00000423435 1973 ntBASIC19.6■□□□□ 0.73
LTN1O94822 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.6■□□□□ 0.73
LTN1O94822 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.6■□□□□ 0.73
LTN1O94822 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LTN1O94822 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LTN1O94822 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC19.59■□□□□ 0.73
LTN1O94822 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.59■□□□□ 0.73
LTN1O94822 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 AC107464.3-201ENST00000609172 737 ntBASIC19.59■□□□□ 0.73
LTN1O94822 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LTN1O94822 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.59■□□□□ 0.73
LTN1O94822 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LTN1O94822 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.59■□□□□ 0.73
LTN1O94822 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.58■□□□□ 0.73
LTN1O94822 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LTN1O94822 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.58■□□□□ 0.73
LTN1O94822 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LTN1O94822 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.58■□□□□ 0.73
LTN1O94822 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LTN1O94822 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
LTN1O94822 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LTN1O94822 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LTN1O94822 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LTN1O94822 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.58■□□□□ 0.73
LTN1O94822 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms