Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AC015910.1-201ENST00000579400 975 ntBASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM235A6NFC5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.05□□□□□ -0.32
TMEM235A6NFC5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 TIMM8BP1-201ENST00000452384 211 ntBASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 BANF1P1-201ENST00000553684 263 ntBASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AC105021.1-202ENST00000570572 669 ntBASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM235A6NFC5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM235A6NFC5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms