Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 MEIS3P1-201ENST00000495167 958 ntBASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC004840.1-201ENST00000636359 365 ntBASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 LINC00552-201ENST00000625151 2579 ntBASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC007686.3-201ENST00000619017 3487 ntBASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HLA-DRB4X5D2U9 AC041040.2-201ENST00000622926 2899 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 FAM8A3P-201ENST00000427218 844 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC104794.3-201ENST00000566840 1248 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC027796.2-201ENST00000575326 344 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 SRD5A3P1-201ENST00000603021 949 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC000095.1-201ENST00000603208 874 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 REXO1L2P-201ENST00000425429 2069 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC079781.5-202ENST00000641784 3743 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AC148477.4-201ENST00000613430 1793 ntBASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HLA-DRB4X5D2U9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HLA-DRB4X5D2U9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms