Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 MIR326-201ENST00000362220 95 ntBASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 SLC25A24P2-201ENST00000415059 510 ntBASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 Z93015.1-201ENST00000451718 390 ntBASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 CICP23-201ENST00000605013 2741 ntBASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN3Q9UPQ7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 KRT18P64-201ENST00000434946 1219 ntBASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 KRT18P43-201ENST00000469825 1281 ntBASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 RNA5SP423-201ENST00000517127 109 ntBASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 MSTO2P-201ENST00000314835 1709 ntBASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN3Q9UPQ7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN3Q9UPQ7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms