Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SSR3Q9UNL2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SSR3Q9UNL2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SSR3Q9UNL2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 VN2R19P-201ENST00000442399 1052 ntBASIC13.64□□□□□ -0.23
SSR3Q9UNL2 AC108751.1-201ENST00000490852 363 ntBASIC13.64□□□□□ -0.23
SSR3Q9UNL2 AF238378.1-201ENST00000526806 358 ntBASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 PPT1-213ENST00000641319 2388 ntBASIC13.64□□□□□ -0.23
SSR3Q9UNL2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSR3Q9UNL2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 COL6A4P2-202ENST00000504443 2753 ntBASIC13.63□□□□□ -0.23
SSR3Q9UNL2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 RNPS1P1-201ENST00000507437 918 ntBASIC13.63□□□□□ -0.23
SSR3Q9UNL2 AC096734.2-201ENST00000562054 433 ntBASIC13.63□□□□□ -0.23
SSR3Q9UNL2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 AC023141.13-201ENST00000604991 943 ntBASIC13.63□□□□□ -0.23
SSR3Q9UNL2 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.63□□□□□ -0.23
SSR3Q9UNL2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms