Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 KRT18P58-201ENST00000527480 1120 ntBASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 KRT8P24-201ENST00000560290 1559 ntBASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 MTDHP5-201ENST00000598980 586 ntBASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIMS3Q9UJD0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC012508.2-201ENST00000567613 1472 ntBASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AL591122.2-201ENST00000624125 1853 ntBASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC007787.1-201ENST00000588095 1583 ntBASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 AC015909.5-201ENST00000624336 2266 ntBASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIMS3Q9UJD0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms