Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AL645939.2-201ENST00000427340 991 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 KRT18P20-201ENST00000548986 1279 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 C2orf69P4-201ENST00000565394 541 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC084262.1-201ENST00000567818 751 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC115284.2-201ENST00000624646 2054 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC138969.3-201ENST00000546612 1459 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC138932.2-201ENST00000548268 1459 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC126755.4-201ENST00000549796 1459 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC009078.3-201ENST00000624205 4084 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 SHC1P1-201ENST00000425230 1745 ntBASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CDC42SE1Q9NRR8 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 C1S-221ENST00000617865 2844 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AL355102.3-201ENST00000554299 1678 ntBASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PC-208ENST00000529047 1607 ntTSL 3 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CDC42SE1Q9NRR8 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms