RNA–Protein interactions for RNA: ENST00000452691.6

CCDC36-204, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC36, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-204ENST00000452691 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
CCDC36-204ENST00000452691 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
CCDC36-204ENST00000452691 ABCC9O60706 1549 aa20.71■□□□□ 0.91
CCDC36-204ENST00000452691 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
CCDC36-204ENST00000452691 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
CCDC36-204ENST00000452691 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
CCDC36-204ENST00000452691 NACADO15069 1562 aa19.95■□□□□ 0.78
CCDC36-204ENST00000452691 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
CCDC36-204ENST00000452691 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
CCDC36-204ENST00000452691 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
CCDC36-204ENST00000452691 MYT1Q01538 1121 aa19.62■□□□□ 0.73
CCDC36-204ENST00000452691 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
CCDC36-204ENST00000452691 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
CCDC36-204ENST00000452691 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
CCDC36-204ENST00000452691 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC36-204ENST00000452691 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
CCDC36-204ENST00000452691 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
CCDC36-204ENST00000452691 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
CCDC36-204ENST00000452691 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
CCDC36-204ENST00000452691 HRCP23327 699 aa18.77■□□□□ 0.59
CCDC36-204ENST00000452691 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
CCDC36-204ENST00000452691 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
CCDC36-204ENST00000452691 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
CCDC36-204ENST00000452691 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
CCDC36-204ENST00000452691 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
CCDC36-204ENST00000452691 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
CCDC36-204ENST00000452691 WIZO95785 1651 aa18.52■□□□□ 0.56
CCDC36-204ENST00000452691 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
CCDC36-204ENST00000452691 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
CCDC36-204ENST00000452691 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
CCDC36-204ENST00000452691 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
CCDC36-204ENST00000452691 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
CCDC36-204ENST00000452691 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
CCDC36-204ENST00000452691 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
CCDC36-204ENST00000452691 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
CCDC36-204ENST00000452691 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
CCDC36-204ENST00000452691 PRKCSHP14314 528 aaPredicted RBP18.22■□□□□ 0.51
CCDC36-204ENST00000452691 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
CCDC36-204ENST00000452691 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
CCDC36-204ENST00000452691 NESP48681 1621 aa18.01■□□□□ 0.47
CCDC36-204ENST00000452691 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
CCDC36-204ENST00000452691 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
CCDC36-204ENST00000452691 ERICH6Q7L0X2 663 aa17.9■□□□□ 0.46
CCDC36-204ENST00000452691 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.46
CCDC36-204ENST00000452691 CFTRP13569 1480 aa17.88■□□□□ 0.45
CCDC36-204ENST00000452691 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
CCDC36-204ENST00000452691 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.45
CCDC36-204ENST00000452691 APLP2Q06481 763 aa17.82■□□□□ 0.44
CCDC36-204ENST00000452691 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
CCDC36-204ENST00000452691 PDS5BQ9NTI5 1447 aa17.78■□□□□ 0.44
CCDC36-204ENST00000452691 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
CCDC36-204ENST00000452691 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.43
CCDC36-204ENST00000452691 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
CCDC36-204ENST00000452691 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
CCDC36-204ENST00000452691 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
CCDC36-204ENST00000452691 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
CCDC36-204ENST00000452691 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
CCDC36-204ENST00000452691 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
CCDC36-204ENST00000452691 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
CCDC36-204ENST00000452691 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
CCDC36-204ENST00000452691 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
CCDC36-204ENST00000452691 WDR62O43379 1518 aa17.51■□□□□ 0.39
CCDC36-204ENST00000452691 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
CCDC36-204ENST00000452691 CUX1P39880 1505 aa17.5■□□□□ 0.39
CCDC36-204ENST00000452691 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
CCDC36-204ENST00000452691 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
CCDC36-204ENST00000452691 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
CCDC36-204ENST00000452691 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CCDC36-204ENST00000452691 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
CCDC36-204ENST00000452691 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
CCDC36-204ENST00000452691 CUX2O14529 1486 aa17.4■□□□□ 0.38
CCDC36-204ENST00000452691 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
CCDC36-204ENST00000452691 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
CCDC36-204ENST00000452691 NEUROD1Q13562 356 aa17.39■□□□□ 0.38
CCDC36-204ENST00000452691 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
CCDC36-204ENST00000452691 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
CCDC36-204ENST00000452691 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
CCDC36-204ENST00000452691 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CCDC36-204ENST00000452691 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
CCDC36-204ENST00000452691 SOGA1O94964 1423 aa17.33■□□□□ 0.36
CCDC36-204ENST00000452691 IFT140Q96RY7 1462 aa17.29■□□□□ 0.36
CCDC36-204ENST00000452691 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
CCDC36-204ENST00000452691 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
CCDC36-204ENST00000452691 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
CCDC36-204ENST00000452691 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
CCDC36-204ENST00000452691 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
CCDC36-204ENST00000452691 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC36-204ENST00000452691 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
CCDC36-204ENST00000452691 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
CCDC36-204ENST00000452691 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
CCDC36-204ENST00000452691 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
CCDC36-204ENST00000452691 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
CCDC36-204ENST00000452691 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
CCDC36-204ENST00000452691 KIF27Q86VH2 1401 aa17.08■□□□□ 0.33
CCDC36-204ENST00000452691 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
CCDC36-204ENST00000452691 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
CCDC36-204ENST00000452691 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
CCDC36-204ENST00000452691 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
CCDC36-204ENST00000452691 FBLN2P98095 1184 aa17.01■□□□□ 0.31
CCDC36-204ENST00000452691 IGF1RP08069 1367 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms