RNA–Protein interactions for RNA: ENST00000411471.6

EPHB6-201, Transcript of EPH receptor B6, humanhuman

TSL 1 (best) BASIC

Gene EPHB6, Length 3,367 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-201ENST00000411471 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
EPHB6-201ENST00000411471 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
EPHB6-201ENST00000411471 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
EPHB6-201ENST00000411471 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
EPHB6-201ENST00000411471 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
EPHB6-201ENST00000411471 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
EPHB6-201ENST00000411471 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
EPHB6-201ENST00000411471 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
EPHB6-201ENST00000411471 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
EPHB6-201ENST00000411471 PPARGC1BQ86YN6 1023 aaKnown RBP19.85■□□□□ 0.77
EPHB6-201ENST00000411471 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
EPHB6-201ENST00000411471 HRCP23327 699 aa19.75■□□□□ 0.75
EPHB6-201ENST00000411471 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
EPHB6-201ENST00000411471 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
EPHB6-201ENST00000411471 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
EPHB6-201ENST00000411471 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
EPHB6-201ENST00000411471 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
EPHB6-201ENST00000411471 TRIM26Q12899 539 aaPredicted RBP19.19■□□□□ 0.66
EPHB6-201ENST00000411471 MYT1Q01538 1121 aa19.15■□□□□ 0.66
EPHB6-201ENST00000411471 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
EPHB6-201ENST00000411471 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
EPHB6-201ENST00000411471 ABCC9O60706 1549 aa18.94■□□□□ 0.62
EPHB6-201ENST00000411471 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.62
EPHB6-201ENST00000411471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
EPHB6-201ENST00000411471 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.6
EPHB6-201ENST00000411471 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
EPHB6-201ENST00000411471 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
EPHB6-201ENST00000411471 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
EPHB6-201ENST00000411471 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
EPHB6-201ENST00000411471 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
EPHB6-201ENST00000411471 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
EPHB6-201ENST00000411471 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
EPHB6-201ENST00000411471 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
EPHB6-201ENST00000411471 YTHDC1Q96MU7 727 aaKnown RBP18.44■□□□□ 0.54
EPHB6-201ENST00000411471 WIZO95785 1651 aa18.42■□□□□ 0.54
EPHB6-201ENST00000411471 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
EPHB6-201ENST00000411471 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
EPHB6-201ENST00000411471 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
EPHB6-201ENST00000411471 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
EPHB6-201ENST00000411471 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
EPHB6-201ENST00000411471 CCDC88BA6NC98 1476 aa18.23■□□□□ 0.51
EPHB6-201ENST00000411471 SOGA1O94964 1423 aa18.23■□□□□ 0.51
EPHB6-201ENST00000411471 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
EPHB6-201ENST00000411471 ACIN1Q9UKV3 1341 aaKnown RBP18.17■□□□□ 0.5
EPHB6-201ENST00000411471 NACADO15069 1562 aa18.16■□□□□ 0.5
EPHB6-201ENST00000411471 APLP2Q06481 763 aa18.15■□□□□ 0.5
EPHB6-201ENST00000411471 CEP162Q5TB80 1403 aa18.14■□□□□ 0.5
EPHB6-201ENST00000411471 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
EPHB6-201ENST00000411471 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
EPHB6-201ENST00000411471 ITGAEP38570 1179 aa18.04■□□□□ 0.48
EPHB6-201ENST00000411471 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
EPHB6-201ENST00000411471 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
EPHB6-201ENST00000411471 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
EPHB6-201ENST00000411471 MIER1Q8N108 512 aa17.94■□□□□ 0.46
EPHB6-201ENST00000411471 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.46
EPHB6-201ENST00000411471 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
EPHB6-201ENST00000411471 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
EPHB6-201ENST00000411471 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
EPHB6-201ENST00000411471 SMARCA2P51531 1590 aa17.84■□□□□ 0.45
EPHB6-201ENST00000411471 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
EPHB6-201ENST00000411471 CLIP1P30622 1438 aa17.81■□□□□ 0.44
EPHB6-201ENST00000411471 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
EPHB6-201ENST00000411471 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
EPHB6-201ENST00000411471 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
EPHB6-201ENST00000411471 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
EPHB6-201ENST00000411471 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
EPHB6-201ENST00000411471 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
EPHB6-201ENST00000411471 EEA1Q15075 1411 aa17.64■□□□□ 0.41
EPHB6-201ENST00000411471 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
EPHB6-201ENST00000411471 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
EPHB6-201ENST00000411471 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
EPHB6-201ENST00000411471 UNC13AQ9UPW8 1703 aa17.59■□□□□ 0.41
EPHB6-201ENST00000411471 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
EPHB6-201ENST00000411471 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
EPHB6-201ENST00000411471 FAM50AQ14320 339 aaKnown RBP17.56■□□□□ 0.4
EPHB6-201ENST00000411471 BCANQ96GW7 911 aa17.56■□□□□ 0.4
EPHB6-201ENST00000411471 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.39
EPHB6-201ENST00000411471 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
EPHB6-201ENST00000411471 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
EPHB6-201ENST00000411471 BICRAQ9NZM4 1560 aa17.44■□□□□ 0.38
EPHB6-201ENST00000411471 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
EPHB6-201ENST00000411471 KIF21BO75037 1637 aa17.4■□□□□ 0.38
EPHB6-201ENST00000411471 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
EPHB6-201ENST00000411471 DHX57Q6P158 1386 aaKnown RBP17.38■□□□□ 0.37
EPHB6-201ENST00000411471 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
EPHB6-201ENST00000411471 ARID3CA6NKF2 412 aa17.32■□□□□ 0.36
EPHB6-201ENST00000411471 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
EPHB6-201ENST00000411471 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
EPHB6-201ENST00000411471 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
EPHB6-201ENST00000411471 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
EPHB6-201ENST00000411471 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.36
EPHB6-201ENST00000411471 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
EPHB6-201ENST00000411471 RAB3GAP2Q9H2M9 1393 aa17.22■□□□□ 0.35
EPHB6-201ENST00000411471 CUX2O14529 1486 aa17.22■□□□□ 0.35
EPHB6-201ENST00000411471 FKBP8Q14318 412 aa17.22■□□□□ 0.35
EPHB6-201ENST00000411471 CUX1P39880 1505 aa17.15■□□□□ 0.34
EPHB6-201ENST00000411471 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
EPHB6-201ENST00000411471 PRXQ9BXM0 1461 aa17.15■□□□□ 0.34
EPHB6-201ENST00000411471 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
EPHB6-201ENST00000411471 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms