RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
PMS2-201ENST00000265849 HRCP23327 699 aa20.43■□□□□ 0.86
PMS2-201ENST00000265849 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
PMS2-201ENST00000265849 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
PMS2-201ENST00000265849 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
PMS2-201ENST00000265849 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
PMS2-201ENST00000265849 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
PMS2-201ENST00000265849 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
PMS2-201ENST00000265849 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
PMS2-201ENST00000265849 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
PMS2-201ENST00000265849 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
PMS2-201ENST00000265849 MYT1Q01538 1121 aa19.49■□□□□ 0.71
PMS2-201ENST00000265849 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
PMS2-201ENST00000265849 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
PMS2-201ENST00000265849 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
PMS2-201ENST00000265849 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
PMS2-201ENST00000265849 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
PMS2-201ENST00000265849 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.6
PMS2-201ENST00000265849 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
PMS2-201ENST00000265849 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
PMS2-201ENST00000265849 ABCC9O60706 1549 aa18.69■□□□□ 0.58
PMS2-201ENST00000265849 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
PMS2-201ENST00000265849 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
PMS2-201ENST00000265849 TRIM41Q8WV44 630 aa18.58■□□□□ 0.57
PMS2-201ENST00000265849 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
PMS2-201ENST00000265849 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
PMS2-201ENST00000265849 FAM9AQ8IZU1 332 aaPredicted RBP18.5■□□□□ 0.55
PMS2-201ENST00000265849 DIEXFQ68CQ4 756 aaKnown RBP18.48■□□□□ 0.55
PMS2-201ENST00000265849 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
PMS2-201ENST00000265849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
PMS2-201ENST00000265849 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
PMS2-201ENST00000265849 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
PMS2-201ENST00000265849 SCRIBQ14160 1630 aa18.21■□□□□ 0.51
PMS2-201ENST00000265849 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
PMS2-201ENST00000265849 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
PMS2-201ENST00000265849 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
PMS2-201ENST00000265849 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
PMS2-201ENST00000265849 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
PMS2-201ENST00000265849 MIER1Q8N108 512 aa18.01■□□□□ 0.47
PMS2-201ENST00000265849 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
PMS2-201ENST00000265849 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
PMS2-201ENST00000265849 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.46
PMS2-201ENST00000265849 WIZO95785 1651 aa17.93■□□□□ 0.46
PMS2-201ENST00000265849 BCL11AQ9H165 835 aa17.92■□□□□ 0.46
PMS2-201ENST00000265849 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
PMS2-201ENST00000265849 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
PMS2-201ENST00000265849 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.44
PMS2-201ENST00000265849 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
PMS2-201ENST00000265849 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
PMS2-201ENST00000265849 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
PMS2-201ENST00000265849 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
PMS2-201ENST00000265849 NACADO15069 1562 aa17.73■□□□□ 0.43
PMS2-201ENST00000265849 ANP32EQ9BTT0 268 aa17.73■□□□□ 0.43
PMS2-201ENST00000265849 SOGA1O94964 1423 aa17.72■□□□□ 0.43
PMS2-201ENST00000265849 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
PMS2-201ENST00000265849 EEA1Q15075 1411 aa17.69■□□□□ 0.42
PMS2-201ENST00000265849 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
PMS2-201ENST00000265849 GOLGA3Q08378 1498 aa17.64■□□□□ 0.41
PMS2-201ENST00000265849 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
PMS2-201ENST00000265849 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
PMS2-201ENST00000265849 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
PMS2-201ENST00000265849 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
PMS2-201ENST00000265849 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
PMS2-201ENST00000265849 APLP2Q06481 763 aa17.53■□□□□ 0.4
PMS2-201ENST00000265849 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
PMS2-201ENST00000265849 KIF21BO75037 1637 aa17.48■□□□□ 0.39
PMS2-201ENST00000265849 CLIP1P30622 1438 aa17.46■□□□□ 0.39
PMS2-201ENST00000265849 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
PMS2-201ENST00000265849 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
PMS2-201ENST00000265849 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
PMS2-201ENST00000265849 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
PMS2-201ENST00000265849 BCANQ96GW7 911 aa17.3■□□□□ 0.36
PMS2-201ENST00000265849 KCNH8Q96L42 1107 aa17.3■□□□□ 0.36
PMS2-201ENST00000265849 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
PMS2-201ENST00000265849 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
PMS2-201ENST00000265849 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
PMS2-201ENST00000265849 FKBP8Q14318 412 aa17.26■□□□□ 0.35
PMS2-201ENST00000265849 CUX2O14529 1486 aa17.24■□□□□ 0.35
PMS2-201ENST00000265849 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
PMS2-201ENST00000265849 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
PMS2-201ENST00000265849 MSH5O43196 834 aa17.14■□□□□ 0.33
PMS2-201ENST00000265849 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
PMS2-201ENST00000265849 NEFLP07196 543 aa17.11■□□□□ 0.33
PMS2-201ENST00000265849 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
PMS2-201ENST00000265849 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
PMS2-201ENST00000265849 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
PMS2-201ENST00000265849 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
PMS2-201ENST00000265849 ITGAEP38570 1179 aa17.06■□□□□ 0.32
PMS2-201ENST00000265849 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
PMS2-201ENST00000265849 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
PMS2-201ENST00000265849 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
PMS2-201ENST00000265849 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
PMS2-201ENST00000265849 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
PMS2-201ENST00000265849 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
PMS2-201ENST00000265849 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
PMS2-201ENST00000265849 CCER2I3L3R5 266 aa17■□□□□ 0.31
PMS2-201ENST00000265849 PRXQ9BXM0 1461 aa17■□□□□ 0.31
PMS2-201ENST00000265849 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
PMS2-201ENST00000265849 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PMS2-201ENST00000265849 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 287.8 ms