Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AC145285.3-201ENST00000564603 959 ntBASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AC127383.1-201ENST00000444697 1800 ntBASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 TRIM80P-201ENST00000455685 2848 ntBASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C12orf4Q9NQ89 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AJ011931.1-201ENST00000618749 2492 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms