Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 PCDHA1-201ENST00000378133 2726 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 AC126365.1-201ENST00000578585 1514 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 FTH1P22-201ENST00000456305 520 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 ORAOV1P1-201ENST00000503108 395 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 POU5F1P2-201ENST00000521750 823 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 AC005041.3-201ENST00000606287 649 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 AC103810.10-201ENST00000606504 343 ntBASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
TNRC6CQ9HCJ0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 AC130709.1-201ENST00000484779 1212 ntBASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 AC008723.1-201ENST00000506922 207 ntBASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TNRC6CQ9HCJ0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 AC090502.4-201ENST00000551714 1386 ntBASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.27■□□□□ 0.51
TNRC6CQ9HCJ0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 DUTP3-201ENST00000450025 415 ntBASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 AC244250.3-201ENST00000620749 366 ntBASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC6CQ9HCJ0 TSPY25P-201ENST00000429463 745 ntBASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.25■□□□□ 0.51
TNRC6CQ9HCJ0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms