Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 CICP8-201ENST00000455800 2813 ntBASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RFWD2Q8NHY2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 AP000347.1-202ENST00000435868 847 ntBASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFWD2Q8NHY2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AC002056.1-201ENST00000395613 760 ntBASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AC008267.7-201ENST00000624570 1194 ntBASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
RFWD2Q8NHY2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms