Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
NKX6-1P78426 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
NKX6-1P78426 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
NKX6-1P78426 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.52□□□□□ -0.24
NKX6-1P78426 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX6-1P78426 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX6-1P78426 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX6-1P78426 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.52□□□□□ -0.24
NKX6-1P78426 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-1P78426 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.52□□□□□ -0.25
NKX6-1P78426 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX6-1P78426 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX6-1P78426 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.52□□□□□ -0.25
NKX6-1P78426 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX6-1P78426 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX6-1P78426 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX6-1P78426 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX6-1P78426 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX6-1P78426 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX6-1P78426 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX6-1P78426 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX6-1P78426 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-1P78426 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-1P78426 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-1P78426 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NKX6-1P78426 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NKX6-1P78426 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.51□□□□□ -0.25
NKX6-1P78426 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-1P78426 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.51□□□□□ -0.25
NKX6-1P78426 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.51□□□□□ -0.25
NKX6-1P78426 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NKX6-1P78426 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NKX6-1P78426 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms