Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
AP3S2P59780 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.14□□□□□ -0.31
AP3S2P59780 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
AP3S2P59780 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 IER3-202ENST00000376377 1350 ntBASIC13.13□□□□□ -0.31
AP3S2P59780 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.13□□□□□ -0.31
AP3S2P59780 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S2P59780 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S2P59780 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AL139010.1-201ENST00000454878 894 ntBASIC13.13□□□□□ -0.31
AP3S2P59780 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S2P59780 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S2P59780 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S2P59780 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AL356488.2-201ENST00000602755 427 ntBASIC13.13□□□□□ -0.31
AP3S2P59780 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.13□□□□□ -0.31
AP3S2P59780 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AL136982.4-201ENST00000437689 1740 ntBASIC13.13□□□□□ -0.31
AP3S2P59780 AC015818.8-201ENST00000587907 1519 ntBASIC13.13□□□□□ -0.31
AP3S2P59780 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
AP3S2P59780 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.13□□□□□ -0.31
AP3S2P59780 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S2P59780 AC099521.3-201ENST00000624251 2938 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 AL591122.2-201ENST00000624125 1853 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 KRT8P24-201ENST00000560290 1559 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 CYP4F24P-201ENST00000586049 1580 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 AL356585.2-201ENST00000625078 2396 ntBASIC13.12□□□□□ -0.31
AP3S2P59780 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S2P59780 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S2P59780 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S2P59780 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S2P59780 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms