Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CR1P49238 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.45□□□□□ -0.26
CX3CR1P49238 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CR1P49238 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.45□□□□□ -0.26
CX3CR1P49238 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CX3CR1P49238 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
CX3CR1P49238 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CR1P49238 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CX3CR1P49238 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CR1P49238 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CR1P49238 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC114501.2-201ENST00000439631 535 ntBASIC13.44□□□□□ -0.26
CX3CR1P49238 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.44□□□□□ -0.26
CX3CR1P49238 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.44□□□□□ -0.26
CX3CR1P49238 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 DUX4L27-201ENST00000554796 1261 ntBASIC13.44□□□□□ -0.26
CX3CR1P49238 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AC000095.1-201ENST00000603208 874 ntBASIC13.44□□□□□ -0.26
CX3CR1P49238 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.44□□□□□ -0.26
CX3CR1P49238 AL390754.1-201ENST00000619088 582 ntBASIC13.44□□□□□ -0.26
CX3CR1P49238 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CX3CR1P49238 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
CX3CR1P49238 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.44□□□□□ -0.26
CX3CR1P49238 LINC00552-201ENST00000625151 2579 ntBASIC13.44□□□□□ -0.26
CX3CR1P49238 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CX3CR1P49238 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.43□□□□□ -0.26
CX3CR1P49238 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.43□□□□□ -0.26
CX3CR1P49238 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CX3CR1P49238 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms