Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 SACS-202ENST00000402364 15134 ntTSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
PCP4P48539 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC10.03□□□□□ -0.8
PCP4P48539 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.03□□□□□ -0.8
PCP4P48539 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
PCP4P48539 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PCP4P48539 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
PCP4P48539 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 AL160286.1-201ENST00000427215 2471 ntBASIC10.02□□□□□ -0.8
PCP4P48539 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 KLHDC4-205ENST00000446344 4444 ntBASIC10.02□□□□□ -0.8
PCP4P48539 NPC1L1-202ENST00000381160 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
PCP4P48539 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
PCP4P48539 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
PCP4P48539 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.02□□□□□ -0.8
PCP4P48539 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 C16orf62-203ENST00000438132 3855 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 MIR648-201ENST00000385046 94 ntBASIC10.02□□□□□ -0.81
PCP4P48539 AC004448.1-201ENST00000458332 883 ntBASIC10.02□□□□□ -0.81
PCP4P48539 AC135782.3-201ENST00000562782 2105 ntBASIC10.02□□□□□ -0.81
PCP4P48539 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 ZNF559-206ENST00000587557 2991 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 NOBOX-202ENST00000483238 1980 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 PPID-201ENST00000307720 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 AC117529.1-201ENST00000505789 2023 ntBASIC10.02□□□□□ -0.81
PCP4P48539 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 ADGRF5P2-201ENST00000423199 1659 ntBASIC10.02□□□□□ -0.81
PCP4P48539 GGT3P-204ENST00000453783 1664 ntBASIC10.02□□□□□ -0.81
PCP4P48539 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 AMER3-201ENST00000321420 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 SLC7A7-204ENST00000397532 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 C11orf54-215ENST00000617482 2417 ntTSL 3 BASIC10.02□□□□□ -0.81
PCP4P48539 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.02□□□□□ -0.81
PCP4P48539 LINC00327-201ENST00000443778 2087 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 AC104394.1-201ENST00000611658 1748 ntBASIC10.02□□□□□ -0.81
PCP4P48539 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.02□□□□□ -0.81
PCP4P48539 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PCP4P48539 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PCP4P48539 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
PCP4P48539 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 AP3B2-203ENST00000535359 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 AC015818.9-201ENST00000591705 4582 ntBASIC10.01□□□□□ -0.81
PCP4P48539 AC015909.3-201ENST00000572855 1794 ntBASIC10.01□□□□□ -0.81
PCP4P48539 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC10.01□□□□□ -0.81
PCP4P48539 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC10.01□□□□□ -0.81
PCP4P48539 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC10.01□□□□□ -0.81
PCP4P48539 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 NPHS1-201ENST00000353632 3741 ntTSL 5 BASIC10.01□□□□□ -0.81
PCP4P48539 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 NTN4-202ENST00000344911 3152 ntTSL 5 BASIC10.01□□□□□ -0.81
PCP4P48539 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 CAMK1G-201ENST00000009105 2612 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
PCP4P48539 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PCP4P48539 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms