RNA–Protein interactions for RNA: ENST00000344911.8

NTN4-202, Transcript of netrin 4, humanhuman

TSL 5 BASIC

Gene NTN4, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTN4-202ENST00000344911 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
NTN4-202ENST00000344911 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
NTN4-202ENST00000344911 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
NTN4-202ENST00000344911 ZCCHC6Q5VYS8 1495 aaKnown RBP17.45■□□□□ 0.38
NTN4-202ENST00000344911 MYT1Q01538 1121 aa17.4■□□□□ 0.38
NTN4-202ENST00000344911 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.36
NTN4-202ENST00000344911 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
NTN4-202ENST00000344911 HRCP23327 699 aa17.13■□□□□ 0.33
NTN4-202ENST00000344911 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
NTN4-202ENST00000344911 ABCC9O60706 1549 aa16.99■□□□□ 0.31
NTN4-202ENST00000344911 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
NTN4-202ENST00000344911 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
NTN4-202ENST00000344911 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
NTN4-202ENST00000344911 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
NTN4-202ENST00000344911 NACADO15069 1562 aa16.67■□□□□ 0.26
NTN4-202ENST00000344911 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
NTN4-202ENST00000344911 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
NTN4-202ENST00000344911 PRKCSHP14314 528 aaPredicted RBP16.53■□□□□ 0.24
NTN4-202ENST00000344911 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
NTN4-202ENST00000344911 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
NTN4-202ENST00000344911 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
NTN4-202ENST00000344911 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
NTN4-202ENST00000344911 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
NTN4-202ENST00000344911 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
NTN4-202ENST00000344911 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
NTN4-202ENST00000344911 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
NTN4-202ENST00000344911 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
NTN4-202ENST00000344911 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
NTN4-202ENST00000344911 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.16
NTN4-202ENST00000344911 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
NTN4-202ENST00000344911 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
NTN4-202ENST00000344911 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.15
NTN4-202ENST00000344911 WIZO95785 1651 aa15.98■□□□□ 0.15
NTN4-202ENST00000344911 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
NTN4-202ENST00000344911 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.15
NTN4-202ENST00000344911 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
NTN4-202ENST00000344911 SMARCA4P51532 1647 aa15.91■□□□□ 0.14
NTN4-202ENST00000344911 APLP2Q06481 763 aa15.84■□□□□ 0.13
NTN4-202ENST00000344911 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
NTN4-202ENST00000344911 ZEB1P37275 1124 aaPredicted RBP15.69■□□□□ 0.1
NTN4-202ENST00000344911 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
NTN4-202ENST00000344911 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
NTN4-202ENST00000344911 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
NTN4-202ENST00000344911 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
NTN4-202ENST00000344911 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
NTN4-202ENST00000344911 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
NTN4-202ENST00000344911 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
NTN4-202ENST00000344911 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
NTN4-202ENST00000344911 EIF4G1Q04637 1599 aaKnown RBP15.59■□□□□ 0.09
NTN4-202ENST00000344911 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
NTN4-202ENST00000344911 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
NTN4-202ENST00000344911 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
NTN4-202ENST00000344911 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
NTN4-202ENST00000344911 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
NTN4-202ENST00000344911 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
NTN4-202ENST00000344911 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
NTN4-202ENST00000344911 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
NTN4-202ENST00000344911 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
NTN4-202ENST00000344911 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
NTN4-202ENST00000344911 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
NTN4-202ENST00000344911 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
NTN4-202ENST00000344911 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
NTN4-202ENST00000344911 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
NTN4-202ENST00000344911 CFTRP13569 1480 aa15.15■□□□□ 0.02
NTN4-202ENST00000344911 SOGA1O94964 1423 aa15.14■□□□□ 0.01
NTN4-202ENST00000344911 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
NTN4-202ENST00000344911 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
NTN4-202ENST00000344911 EIF5BO60841 1220 aaKnown RBP15.1■□□□□ 0.01
NTN4-202ENST00000344911 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
NTN4-202ENST00000344911 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
NTN4-202ENST00000344911 TOP2BQ02880 1626 aa15.04■□□□□ -0
NTN4-202ENST00000344911 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
NTN4-202ENST00000344911 PRDM2Q13029 1718 aa15.03■□□□□ -0
NTN4-202ENST00000344911 CUX1P39880 1505 aa15.02■□□□□ -0
NTN4-202ENST00000344911 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
NTN4-202ENST00000344911 NESP48681 1621 aa15□□□□□ -0.01
NTN4-202ENST00000344911 UBE2Q2Q8WVN8 375 aa15□□□□□ -0.01
NTN4-202ENST00000344911 SUPT16HQ9Y5B9 1047 aaKnown RBP14.99□□□□□ -0.01
NTN4-202ENST00000344911 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
NTN4-202ENST00000344911 EEA1Q15075 1411 aa14.94□□□□□ -0.02
NTN4-202ENST00000344911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
NTN4-202ENST00000344911 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
NTN4-202ENST00000344911 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
NTN4-202ENST00000344911 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
NTN4-202ENST00000344911 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
NTN4-202ENST00000344911 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
NTN4-202ENST00000344911 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
NTN4-202ENST00000344911 MIER1Q8N108 512 aa14.84□□□□□ -0.03
NTN4-202ENST00000344911 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
NTN4-202ENST00000344911 DAXXQ9UER7 740 aaPredicted RBP14.81□□□□□ -0.04
NTN4-202ENST00000344911 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
NTN4-202ENST00000344911 KIF21BO75037 1637 aa14.81□□□□□ -0.04
NTN4-202ENST00000344911 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
NTN4-202ENST00000344911 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
NTN4-202ENST00000344911 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
NTN4-202ENST00000344911 DEKP35659 375 aaKnown RBP14.79□□□□□ -0.04
NTN4-202ENST00000344911 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
NTN4-202ENST00000344911 TOPBP1Q92547 1522 aa14.77□□□□□ -0.04
NTN4-202ENST00000344911 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.05
NTN4-202ENST00000344911 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms