RNA–Protein interactions for RNA: ENST00000510636.5

CDHR2-206, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,509 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-206ENST00000510636 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
CDHR2-206ENST00000510636 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
CDHR2-206ENST00000510636 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
CDHR2-206ENST00000510636 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
CDHR2-206ENST00000510636 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
CDHR2-206ENST00000510636 APLP2Q06481 763 aa17.77■□□□□ 0.44
CDHR2-206ENST00000510636 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
CDHR2-206ENST00000510636 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
CDHR2-206ENST00000510636 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
CDHR2-206ENST00000510636 ABCC9O60706 1549 aa17.58■□□□□ 0.4
CDHR2-206ENST00000510636 MYT1Q01538 1121 aa17.5■□□□□ 0.39
CDHR2-206ENST00000510636 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
CDHR2-206ENST00000510636 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
CDHR2-206ENST00000510636 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■□□□□ 11.2
CDHR2-206ENST00000510636 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
CDHR2-206ENST00000510636 TTBK1Q5TCY1 1321 aaPredicted RBP17.23■□□□□ 0.35
CDHR2-206ENST00000510636 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
CDHR2-206ENST00000510636 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
CDHR2-206ENST00000510636 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
CDHR2-206ENST00000510636 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
CDHR2-206ENST00000510636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
CDHR2-206ENST00000510636 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
CDHR2-206ENST00000510636 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
CDHR2-206ENST00000510636 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
CDHR2-206ENST00000510636 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
CDHR2-206ENST00000510636 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.26
CDHR2-206ENST00000510636 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
CDHR2-206ENST00000510636 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
CDHR2-206ENST00000510636 HRCP23327 699 aa16.69■□□□□ 0.26
CDHR2-206ENST00000510636 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
CDHR2-206ENST00000510636 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
CDHR2-206ENST00000510636 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
CDHR2-206ENST00000510636 ITGAEP38570 1179 aa16.57■□□□□ 0.24
CDHR2-206ENST00000510636 FBLN2P98095 1184 aa16.5■□□□□ 0.23
CDHR2-206ENST00000510636 NACADO15069 1562 aa16.47■□□□□ 0.23
CDHR2-206ENST00000510636 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
CDHR2-206ENST00000510636 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
CDHR2-206ENST00000510636 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
CDHR2-206ENST00000510636 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
CDHR2-206ENST00000510636 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
CDHR2-206ENST00000510636 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
CDHR2-206ENST00000510636 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
CDHR2-206ENST00000510636 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
CDHR2-206ENST00000510636 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
CDHR2-206ENST00000510636 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
CDHR2-206ENST00000510636 NEFLP07196 543 aa16.09■□□□□ 0.17
CDHR2-206ENST00000510636 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
CDHR2-206ENST00000510636 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
CDHR2-206ENST00000510636 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDHR2-206ENST00000510636 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.15
CDHR2-206ENST00000510636 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
CDHR2-206ENST00000510636 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
CDHR2-206ENST00000510636 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
CDHR2-206ENST00000510636 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
CDHR2-206ENST00000510636 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
CDHR2-206ENST00000510636 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
CDHR2-206ENST00000510636 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
CDHR2-206ENST00000510636 EEA1Q15075 1411 aa15.88■□□□□ 0.13
CDHR2-206ENST00000510636 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
CDHR2-206ENST00000510636 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
CDHR2-206ENST00000510636 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
CDHR2-206ENST00000510636 ESF1Q9H501 851 aaKnown RBP15.84■□□□□ 0.13
CDHR2-206ENST00000510636 ERCC6Q03468 1493 aa15.83■□□□□ 0.13
CDHR2-206ENST00000510636 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
CDHR2-206ENST00000510636 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
CDHR2-206ENST00000510636 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
CDHR2-206ENST00000510636 CLIP1P30622 1438 aa15.75■□□□□ 0.11
CDHR2-206ENST00000510636 BCANQ96GW7 911 aa15.74■□□□□ 0.11
CDHR2-206ENST00000510636 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
CDHR2-206ENST00000510636 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
CDHR2-206ENST00000510636 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
CDHR2-206ENST00000510636 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
CDHR2-206ENST00000510636 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
CDHR2-206ENST00000510636 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
CDHR2-206ENST00000510636 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
CDHR2-206ENST00000510636 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
CDHR2-206ENST00000510636 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
CDHR2-206ENST00000510636 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
CDHR2-206ENST00000510636 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
CDHR2-206ENST00000510636 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
CDHR2-206ENST00000510636 ANP32CO43423 234 aa15.62■□□□□ 0.09
CDHR2-206ENST00000510636 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
CDHR2-206ENST00000510636 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
CDHR2-206ENST00000510636 TONSLQ96HA7 1378 aa15.58■□□□□ 0.09
CDHR2-206ENST00000510636 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
CDHR2-206ENST00000510636 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
CDHR2-206ENST00000510636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.085e-7■■□□□ 12.5
CDHR2-206ENST00000510636 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
CDHR2-206ENST00000510636 CUX2O14529 1486 aa15.56■□□□□ 0.08
CDHR2-206ENST00000510636 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
CDHR2-206ENST00000510636 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
CDHR2-206ENST00000510636 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
CDHR2-206ENST00000510636 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
CDHR2-206ENST00000510636 NEFMP07197 916 aa15.5■□□□□ 0.07
CDHR2-206ENST00000510636 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
CDHR2-206ENST00000510636 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
CDHR2-206ENST00000510636 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
CDHR2-206ENST00000510636 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.07
CDHR2-206ENST00000510636 SOGA1O94964 1423 aa15.45■□□□□ 0.06
CDHR2-206ENST00000510636 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms