RNA–Protein interactions for RNA: ENST00000353632.6

NPHS1-201, Transcript of NPHS1, nephrin, humanhuman

TSL 5 BASIC

Gene NPHS1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-201ENST00000353632 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
NPHS1-201ENST00000353632 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
NPHS1-201ENST00000353632 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
NPHS1-201ENST00000353632 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.74
NPHS1-201ENST00000353632 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
NPHS1-201ENST00000353632 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
NPHS1-201ENST00000353632 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
NPHS1-201ENST00000353632 HRCP23327 699 aa18.66■□□□□ 0.58
NPHS1-201ENST00000353632 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
NPHS1-201ENST00000353632 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
NPHS1-201ENST00000353632 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
NPHS1-201ENST00000353632 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.51
NPHS1-201ENST00000353632 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
NPHS1-201ENST00000353632 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
NPHS1-201ENST00000353632 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
NPHS1-201ENST00000353632 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
NPHS1-201ENST00000353632 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
NPHS1-201ENST00000353632 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.43
NPHS1-201ENST00000353632 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
NPHS1-201ENST00000353632 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
NPHS1-201ENST00000353632 MYT1Q01538 1121 aa17.67■□□□□ 0.42
NPHS1-201ENST00000353632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
NPHS1-201ENST00000353632 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
NPHS1-201ENST00000353632 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
NPHS1-201ENST00000353632 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
NPHS1-201ENST00000353632 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
NPHS1-201ENST00000353632 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
NPHS1-201ENST00000353632 UBTFP17480 764 aaKnown RBP17.44■□□□□ 0.38
NPHS1-201ENST00000353632 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
NPHS1-201ENST00000353632 NEUROD1Q13562 356 aa17.39■□□□□ 0.38
NPHS1-201ENST00000353632 ACIN1Q9UKV3 1341 aaKnown RBP17.38■□□□□ 0.37
NPHS1-201ENST00000353632 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
NPHS1-201ENST00000353632 APLP2Q06481 763 aa17.29■□□□□ 0.36
NPHS1-201ENST00000353632 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
NPHS1-201ENST00000353632 ABCC9O60706 1549 aa17.04■□□□□ 0.32
NPHS1-201ENST00000353632 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
NPHS1-201ENST00000353632 ITGAEP38570 1179 aa17.02■□□□□ 0.31
NPHS1-201ENST00000353632 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
NPHS1-201ENST00000353632 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
NPHS1-201ENST00000353632 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
NPHS1-201ENST00000353632 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
NPHS1-201ENST00000353632 BCANQ96GW7 911 aa16.85■□□□□ 0.29
NPHS1-201ENST00000353632 MIER1Q8N108 512 aa16.8■□□□□ 0.28
NPHS1-201ENST00000353632 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
NPHS1-201ENST00000353632 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
NPHS1-201ENST00000353632 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
NPHS1-201ENST00000353632 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
NPHS1-201ENST00000353632 NEFLP07196 543 aa16.6■□□□□ 0.25
NPHS1-201ENST00000353632 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
NPHS1-201ENST00000353632 CNGB1Q14028 1251 aaPredicted RBP16.55■□□□□ 0.24
NPHS1-201ENST00000353632 SOGA1O94964 1423 aa16.49■□□□□ 0.23
NPHS1-201ENST00000353632 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
NPHS1-201ENST00000353632 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
NPHS1-201ENST00000353632 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
NPHS1-201ENST00000353632 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
NPHS1-201ENST00000353632 FKBP8Q14318 412 aa16.42■□□□□ 0.22
NPHS1-201ENST00000353632 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
NPHS1-201ENST00000353632 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
NPHS1-201ENST00000353632 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
NPHS1-201ENST00000353632 ANP32EQ9BTT0 268 aa16.4■□□□□ 0.22
NPHS1-201ENST00000353632 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
NPHS1-201ENST00000353632 DDX10Q13206 875 aaKnown RBP16.35■□□□□ 0.21
NPHS1-201ENST00000353632 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
NPHS1-201ENST00000353632 CLIP1P30622 1438 aa16.34■□□□□ 0.21
NPHS1-201ENST00000353632 NACADO15069 1562 aa16.33■□□□□ 0.21
NPHS1-201ENST00000353632 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
NPHS1-201ENST00000353632 WIZO95785 1651 aa16.32■□□□□ 0.2
NPHS1-201ENST00000353632 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
NPHS1-201ENST00000353632 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
NPHS1-201ENST00000353632 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
NPHS1-201ENST00000353632 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
NPHS1-201ENST00000353632 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
NPHS1-201ENST00000353632 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
NPHS1-201ENST00000353632 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
NPHS1-201ENST00000353632 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
NPHS1-201ENST00000353632 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
NPHS1-201ENST00000353632 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
NPHS1-201ENST00000353632 ANP32CO43423 234 aa16.17■□□□□ 0.18
NPHS1-201ENST00000353632 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
NPHS1-201ENST00000353632 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
NPHS1-201ENST00000353632 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
NPHS1-201ENST00000353632 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
NPHS1-201ENST00000353632 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.17
NPHS1-201ENST00000353632 EEA1Q15075 1411 aa16.06■□□□□ 0.16
NPHS1-201ENST00000353632 NBR1Q14596 966 aa16.06■□□□□ 0.16
NPHS1-201ENST00000353632 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
NPHS1-201ENST00000353632 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
NPHS1-201ENST00000353632 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
NPHS1-201ENST00000353632 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
NPHS1-201ENST00000353632 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
NPHS1-201ENST00000353632 CHIC2Q9UKJ5 165 aa15.98■□□□□ 0.15
NPHS1-201ENST00000353632 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
NPHS1-201ENST00000353632 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
NPHS1-201ENST00000353632 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
NPHS1-201ENST00000353632 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
NPHS1-201ENST00000353632 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
NPHS1-201ENST00000353632 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
NPHS1-201ENST00000353632 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
NPHS1-201ENST00000353632 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
NPHS1-201ENST00000353632 RRP7BPQ9NSQ0 103 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms