RNA–Protein interactions for RNA: ENST00000321420.4

AMER3-201, Transcript of APC membrane recruitment protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMER3, Length 3,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMER3-201ENST00000321420 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
AMER3-201ENST00000321420 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
AMER3-201ENST00000321420 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
AMER3-201ENST00000321420 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
AMER3-201ENST00000321420 ABCC9O60706 1549 aa21.67■■□□□ 1.06
AMER3-201ENST00000321420 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
AMER3-201ENST00000321420 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
AMER3-201ENST00000321420 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
AMER3-201ENST00000321420 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
AMER3-201ENST00000321420 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.88
AMER3-201ENST00000321420 NACADO15069 1562 aa20.46■□□□□ 0.87
AMER3-201ENST00000321420 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
AMER3-201ENST00000321420 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
AMER3-201ENST00000321420 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
AMER3-201ENST00000321420 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.8
AMER3-201ENST00000321420 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
AMER3-201ENST00000321420 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
AMER3-201ENST00000321420 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
AMER3-201ENST00000321420 WIZO95785 1651 aa19.76■□□□□ 0.75
AMER3-201ENST00000321420 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
AMER3-201ENST00000321420 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.72
AMER3-201ENST00000321420 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
AMER3-201ENST00000321420 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
AMER3-201ENST00000321420 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
AMER3-201ENST00000321420 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
AMER3-201ENST00000321420 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
AMER3-201ENST00000321420 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
AMER3-201ENST00000321420 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
AMER3-201ENST00000321420 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
AMER3-201ENST00000321420 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
AMER3-201ENST00000321420 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
AMER3-201ENST00000321420 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
AMER3-201ENST00000321420 TOP2AP11388 1531 aaKnown RBP19.21■□□□□ 0.67
AMER3-201ENST00000321420 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
AMER3-201ENST00000321420 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
AMER3-201ENST00000321420 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
AMER3-201ENST00000321420 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
AMER3-201ENST00000321420 NCAPD3P42695 1498 aa19.02■□□□□ 0.64
AMER3-201ENST00000321420 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
AMER3-201ENST00000321420 NESP48681 1621 aa18.98■□□□□ 0.63
AMER3-201ENST00000321420 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
AMER3-201ENST00000321420 HRCP23327 699 aa18.86■□□□□ 0.61
AMER3-201ENST00000321420 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
AMER3-201ENST00000321420 SOGA1O94964 1423 aa18.8■□□□□ 0.6
AMER3-201ENST00000321420 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
AMER3-201ENST00000321420 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
AMER3-201ENST00000321420 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
AMER3-201ENST00000321420 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
AMER3-201ENST00000321420 UBTFP17480 764 aaKnown RBP18.7■□□□□ 0.58
AMER3-201ENST00000321420 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
AMER3-201ENST00000321420 CFTRP13569 1480 aa18.66■□□□□ 0.58
AMER3-201ENST00000321420 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
AMER3-201ENST00000321420 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
AMER3-201ENST00000321420 CUX1P39880 1505 aa18.54■□□□□ 0.56
AMER3-201ENST00000321420 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
AMER3-201ENST00000321420 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
AMER3-201ENST00000321420 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
AMER3-201ENST00000321420 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
AMER3-201ENST00000321420 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
AMER3-201ENST00000321420 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
AMER3-201ENST00000321420 CUX2O14529 1486 aa18.41■□□□□ 0.54
AMER3-201ENST00000321420 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
AMER3-201ENST00000321420 FBLN2P98095 1184 aa18.38■□□□□ 0.53
AMER3-201ENST00000321420 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
AMER3-201ENST00000321420 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
AMER3-201ENST00000321420 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
AMER3-201ENST00000321420 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
AMER3-201ENST00000321420 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
AMER3-201ENST00000321420 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
AMER3-201ENST00000321420 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
AMER3-201ENST00000321420 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
AMER3-201ENST00000321420 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
AMER3-201ENST00000321420 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
AMER3-201ENST00000321420 ARID3CA6NKF2 412 aa18.2■□□□□ 0.5
AMER3-201ENST00000321420 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
AMER3-201ENST00000321420 IGF1RP08069 1367 aa18.18■□□□□ 0.5
AMER3-201ENST00000321420 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
AMER3-201ENST00000321420 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
AMER3-201ENST00000321420 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
AMER3-201ENST00000321420 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
AMER3-201ENST00000321420 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.5
AMER3-201ENST00000321420 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
AMER3-201ENST00000321420 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
AMER3-201ENST00000321420 EEA1Q15075 1411 aa18.08■□□□□ 0.49
AMER3-201ENST00000321420 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
AMER3-201ENST00000321420 CLIP1P30622 1438 aa18.04■□□□□ 0.48
AMER3-201ENST00000321420 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
AMER3-201ENST00000321420 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
AMER3-201ENST00000321420 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
AMER3-201ENST00000321420 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
AMER3-201ENST00000321420 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
AMER3-201ENST00000321420 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
AMER3-201ENST00000321420 APLP2Q06481 763 aa17.97■□□□□ 0.47
AMER3-201ENST00000321420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
AMER3-201ENST00000321420 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
AMER3-201ENST00000321420 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
AMER3-201ENST00000321420 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
AMER3-201ENST00000321420 WDR62O43379 1518 aa17.89■□□□□ 0.45
AMER3-201ENST00000321420 ITGAEP38570 1179 aa17.89■□□□□ 0.45
AMER3-201ENST00000321420 KIF21BO75037 1637 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms