RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
BDNF-215ENST00000530861 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
BDNF-215ENST00000530861 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
BDNF-215ENST00000530861 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
BDNF-215ENST00000530861 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
BDNF-215ENST00000530861 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
BDNF-215ENST00000530861 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
BDNF-215ENST00000530861 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
BDNF-215ENST00000530861 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
BDNF-215ENST00000530861 PPARGC1BQ86YN6 1023 aaKnown RBP20.59■□□□□ 0.89
BDNF-215ENST00000530861 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.88
BDNF-215ENST00000530861 ABCC9O60706 1549 aa20.51■□□□□ 0.87
BDNF-215ENST00000530861 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
BDNF-215ENST00000530861 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
BDNF-215ENST00000530861 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
BDNF-215ENST00000530861 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
BDNF-215ENST00000530861 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
BDNF-215ENST00000530861 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
BDNF-215ENST00000530861 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
BDNF-215ENST00000530861 HRCP23327 699 aa19.68■□□□□ 0.74
BDNF-215ENST00000530861 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
BDNF-215ENST00000530861 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
BDNF-215ENST00000530861 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
BDNF-215ENST00000530861 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
BDNF-215ENST00000530861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
BDNF-215ENST00000530861 APLP2Q06481 763 aa19.54■□□□□ 0.72
BDNF-215ENST00000530861 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
BDNF-215ENST00000530861 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
BDNF-215ENST00000530861 ITGAEP38570 1179 aa19.43■□□□□ 0.7
BDNF-215ENST00000530861 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
BDNF-215ENST00000530861 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
BDNF-215ENST00000530861 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
BDNF-215ENST00000530861 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
BDNF-215ENST00000530861 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
BDNF-215ENST00000530861 RB1CC1Q8TDY2 1594 aa19.04■□□□□ 0.64
BDNF-215ENST00000530861 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
BDNF-215ENST00000530861 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
BDNF-215ENST00000530861 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
BDNF-215ENST00000530861 CNGB1Q14028 1251 aaPredicted RBP18.84■□□□□ 0.61
BDNF-215ENST00000530861 SOGA1O94964 1423 aa18.83■□□□□ 0.61
BDNF-215ENST00000530861 WIZO95785 1651 aa18.82■□□□□ 0.6
BDNF-215ENST00000530861 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
BDNF-215ENST00000530861 NACADO15069 1562 aa18.8■□□□□ 0.6
BDNF-215ENST00000530861 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
BDNF-215ENST00000530861 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
BDNF-215ENST00000530861 DIEXFQ68CQ4 756 aaKnown RBP18.73■□□□□ 0.59
BDNF-215ENST00000530861 NEUROD1Q13562 356 aa18.71■□□□□ 0.59
BDNF-215ENST00000530861 FBLN2P98095 1184 aa18.68■□□□□ 0.58
BDNF-215ENST00000530861 RUSC2Q8N2Y8 1516 aa18.65■□□□□ 0.58
BDNF-215ENST00000530861 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
BDNF-215ENST00000530861 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
BDNF-215ENST00000530861 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
BDNF-215ENST00000530861 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
BDNF-215ENST00000530861 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.55
BDNF-215ENST00000530861 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
BDNF-215ENST00000530861 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
BDNF-215ENST00000530861 CLIP1P30622 1438 aa18.44■□□□□ 0.54
BDNF-215ENST00000530861 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
BDNF-215ENST00000530861 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
BDNF-215ENST00000530861 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
BDNF-215ENST00000530861 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
BDNF-215ENST00000530861 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
BDNF-215ENST00000530861 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
BDNF-215ENST00000530861 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
BDNF-215ENST00000530861 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
BDNF-215ENST00000530861 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
BDNF-215ENST00000530861 MIER1Q8N108 512 aa18.28■□□□□ 0.52
BDNF-215ENST00000530861 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
BDNF-215ENST00000530861 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
BDNF-215ENST00000530861 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
BDNF-215ENST00000530861 BCANQ96GW7 911 aa18.23■□□□□ 0.51
BDNF-215ENST00000530861 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
BDNF-215ENST00000530861 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
BDNF-215ENST00000530861 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
BDNF-215ENST00000530861 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
BDNF-215ENST00000530861 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
BDNF-215ENST00000530861 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
BDNF-215ENST00000530861 DDX10Q13206 875 aaKnown RBP18.16■□□□□ 0.5
BDNF-215ENST00000530861 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
BDNF-215ENST00000530861 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
BDNF-215ENST00000530861 SMARCA2P51531 1590 aa18.14■□□□□ 0.49
BDNF-215ENST00000530861 CUX2O14529 1486 aa18.12■□□□□ 0.49
BDNF-215ENST00000530861 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
BDNF-215ENST00000530861 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
BDNF-215ENST00000530861 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
BDNF-215ENST00000530861 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
BDNF-215ENST00000530861 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.48
BDNF-215ENST00000530861 EEA1Q15075 1411 aa18.01■□□□□ 0.47
BDNF-215ENST00000530861 FOXD1Q16676 465 aa17.97■□□□□ 0.47
BDNF-215ENST00000530861 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
BDNF-215ENST00000530861 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
BDNF-215ENST00000530861 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
BDNF-215ENST00000530861 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
BDNF-215ENST00000530861 SYNJ1O43426 1573 aa17.89■□□□□ 0.46
BDNF-215ENST00000530861 CADPSQ9ULU8 1353 aa17.89■□□□□ 0.45
BDNF-215ENST00000530861 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
BDNF-215ENST00000530861 NESP48681 1621 aa17.88■□□□□ 0.45
BDNF-215ENST00000530861 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
BDNF-215ENST00000530861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
BDNF-215ENST00000530861 KDM2AQ9Y2K7 1162 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms