RNA–Protein interactions for RNA: ENST00000535359.5

AP3B2-203, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3B2, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-203ENST00000535359 NISCHQ9Y2I1 1504 aa23.96■■□□□ 1.43
AP3B2-203ENST00000535359 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
AP3B2-203ENST00000535359 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
AP3B2-203ENST00000535359 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
AP3B2-203ENST00000535359 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
AP3B2-203ENST00000535359 ABCC9O60706 1549 aa19.77■□□□□ 0.76
AP3B2-203ENST00000535359 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
AP3B2-203ENST00000535359 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
AP3B2-203ENST00000535359 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
AP3B2-203ENST00000535359 NACADO15069 1562 aa19.31■□□□□ 0.68
AP3B2-203ENST00000535359 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
AP3B2-203ENST00000535359 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
AP3B2-203ENST00000535359 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
AP3B2-203ENST00000535359 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
AP3B2-203ENST00000535359 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
AP3B2-203ENST00000535359 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
AP3B2-203ENST00000535359 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.58
AP3B2-203ENST00000535359 HRCP23327 699 aa18.63■□□□□ 0.57
AP3B2-203ENST00000535359 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
AP3B2-203ENST00000535359 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
AP3B2-203ENST00000535359 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
AP3B2-203ENST00000535359 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
AP3B2-203ENST00000535359 WIZO95785 1651 aa18.39■□□□□ 0.54
AP3B2-203ENST00000535359 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
AP3B2-203ENST00000535359 PPARGC1BQ86YN6 1023 aaKnown RBP18.34■□□□□ 0.53
AP3B2-203ENST00000535359 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
AP3B2-203ENST00000535359 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
AP3B2-203ENST00000535359 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
AP3B2-203ENST00000535359 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
AP3B2-203ENST00000535359 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
AP3B2-203ENST00000535359 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
AP3B2-203ENST00000535359 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
AP3B2-203ENST00000535359 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
AP3B2-203ENST00000535359 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
AP3B2-203ENST00000535359 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
AP3B2-203ENST00000535359 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
AP3B2-203ENST00000535359 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
AP3B2-203ENST00000535359 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
AP3B2-203ENST00000535359 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
AP3B2-203ENST00000535359 ABCC8Q09428 1581 aa17.77■□□□□ 0.43
AP3B2-203ENST00000535359 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
AP3B2-203ENST00000535359 MYT1Q01538 1121 aa17.74■□□□□ 0.43
AP3B2-203ENST00000535359 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
AP3B2-203ENST00000535359 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
AP3B2-203ENST00000535359 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
AP3B2-203ENST00000535359 CFTRP13569 1480 aa17.54■□□□□ 0.4
AP3B2-203ENST00000535359 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
AP3B2-203ENST00000535359 SOGA1O94964 1423 aa17.52■□□□□ 0.39
AP3B2-203ENST00000535359 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
AP3B2-203ENST00000535359 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
AP3B2-203ENST00000535359 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
AP3B2-203ENST00000535359 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
AP3B2-203ENST00000535359 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
AP3B2-203ENST00000535359 EEA1Q15075 1411 aa17.37■□□□□ 0.37
AP3B2-203ENST00000535359 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
AP3B2-203ENST00000535359 NESP48681 1621 aa17.36■□□□□ 0.37
AP3B2-203ENST00000535359 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
AP3B2-203ENST00000535359 CUX1P39880 1505 aa17.33■□□□□ 0.37
AP3B2-203ENST00000535359 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
AP3B2-203ENST00000535359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
AP3B2-203ENST00000535359 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
AP3B2-203ENST00000535359 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
AP3B2-203ENST00000535359 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
AP3B2-203ENST00000535359 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
AP3B2-203ENST00000535359 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
AP3B2-203ENST00000535359 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
AP3B2-203ENST00000535359 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
AP3B2-203ENST00000535359 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
AP3B2-203ENST00000535359 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
AP3B2-203ENST00000535359 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
AP3B2-203ENST00000535359 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
AP3B2-203ENST00000535359 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
AP3B2-203ENST00000535359 CUX2O14529 1486 aa17.14■□□□□ 0.34
AP3B2-203ENST00000535359 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
AP3B2-203ENST00000535359 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
AP3B2-203ENST00000535359 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
AP3B2-203ENST00000535359 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
AP3B2-203ENST00000535359 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
AP3B2-203ENST00000535359 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.33
AP3B2-203ENST00000535359 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
AP3B2-203ENST00000535359 KIF21BO75037 1637 aa17.07■□□□□ 0.32
AP3B2-203ENST00000535359 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
AP3B2-203ENST00000535359 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
AP3B2-203ENST00000535359 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
AP3B2-203ENST00000535359 IGF1RP08069 1367 aa17.04■□□□□ 0.32
AP3B2-203ENST00000535359 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
AP3B2-203ENST00000535359 CLIP1P30622 1438 aa17■□□□□ 0.31
AP3B2-203ENST00000535359 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
AP3B2-203ENST00000535359 CARMIL1Q5VZK9 1371 aa16.98■□□□□ 0.31
AP3B2-203ENST00000535359 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
AP3B2-203ENST00000535359 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
AP3B2-203ENST00000535359 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
AP3B2-203ENST00000535359 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
AP3B2-203ENST00000535359 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
AP3B2-203ENST00000535359 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
AP3B2-203ENST00000535359 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
AP3B2-203ENST00000535359 APLP2Q06481 763 aa16.87■□□□□ 0.29
AP3B2-203ENST00000535359 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
AP3B2-203ENST00000535359 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
AP3B2-203ENST00000535359 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms