RNA–Protein interactions for RNA: ENST00000550413.1

AMIGO2-203, Transcript of adhesion molecule with Ig like domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMIGO2, Length 2,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO2-203ENST00000550413 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
AMIGO2-203ENST00000550413 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
AMIGO2-203ENST00000550413 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
AMIGO2-203ENST00000550413 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
AMIGO2-203ENST00000550413 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
AMIGO2-203ENST00000550413 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
AMIGO2-203ENST00000550413 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
AMIGO2-203ENST00000550413 HRCP23327 699 aa18.96■□□□□ 0.63
AMIGO2-203ENST00000550413 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
AMIGO2-203ENST00000550413 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
AMIGO2-203ENST00000550413 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
AMIGO2-203ENST00000550413 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
AMIGO2-203ENST00000550413 ABCC9O60706 1549 aa18.42■□□□□ 0.54
AMIGO2-203ENST00000550413 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
AMIGO2-203ENST00000550413 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
AMIGO2-203ENST00000550413 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
AMIGO2-203ENST00000550413 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
AMIGO2-203ENST00000550413 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
AMIGO2-203ENST00000550413 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
AMIGO2-203ENST00000550413 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
AMIGO2-203ENST00000550413 MYT1Q01538 1121 aa18.03■□□□□ 0.48
AMIGO2-203ENST00000550413 TRIM41Q8WV44 630 aa18■□□□□ 0.47
AMIGO2-203ENST00000550413 NACADO15069 1562 aa17.82■□□□□ 0.44
AMIGO2-203ENST00000550413 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
AMIGO2-203ENST00000550413 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
AMIGO2-203ENST00000550413 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
AMIGO2-203ENST00000550413 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
AMIGO2-203ENST00000550413 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
AMIGO2-203ENST00000550413 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
AMIGO2-203ENST00000550413 WIZO95785 1651 aa17.66■□□□□ 0.42
AMIGO2-203ENST00000550413 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
AMIGO2-203ENST00000550413 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
AMIGO2-203ENST00000550413 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
AMIGO2-203ENST00000550413 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
AMIGO2-203ENST00000550413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
AMIGO2-203ENST00000550413 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
AMIGO2-203ENST00000550413 EEA1Q15075 1411 aa17.36■□□□□ 0.37
AMIGO2-203ENST00000550413 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
AMIGO2-203ENST00000550413 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
AMIGO2-203ENST00000550413 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
AMIGO2-203ENST00000550413 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
AMIGO2-203ENST00000550413 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
AMIGO2-203ENST00000550413 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
AMIGO2-203ENST00000550413 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
AMIGO2-203ENST00000550413 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
AMIGO2-203ENST00000550413 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
AMIGO2-203ENST00000550413 SOGA1O94964 1423 aa17.22■□□□□ 0.35
AMIGO2-203ENST00000550413 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
AMIGO2-203ENST00000550413 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
AMIGO2-203ENST00000550413 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
AMIGO2-203ENST00000550413 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
AMIGO2-203ENST00000550413 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
AMIGO2-203ENST00000550413 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
AMIGO2-203ENST00000550413 KIF21BO75037 1637 aa17.1■□□□□ 0.33
AMIGO2-203ENST00000550413 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
AMIGO2-203ENST00000550413 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
AMIGO2-203ENST00000550413 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
AMIGO2-203ENST00000550413 TTBK1Q5TCY1 1321 aaPredicted RBP17.03■□□□□ 0.32
AMIGO2-203ENST00000550413 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
AMIGO2-203ENST00000550413 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
AMIGO2-203ENST00000550413 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
AMIGO2-203ENST00000550413 CLIP1P30622 1438 aa16.96■□□□□ 0.31
AMIGO2-203ENST00000550413 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
AMIGO2-203ENST00000550413 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
AMIGO2-203ENST00000550413 MIER1Q8N108 512 aa16.83■□□□□ 0.29
AMIGO2-203ENST00000550413 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
AMIGO2-203ENST00000550413 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
AMIGO2-203ENST00000550413 APLP2Q06481 763 aa16.81■□□□□ 0.28
AMIGO2-203ENST00000550413 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
AMIGO2-203ENST00000550413 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
AMIGO2-203ENST00000550413 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
AMIGO2-203ENST00000550413 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
AMIGO2-203ENST00000550413 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
AMIGO2-203ENST00000550413 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
AMIGO2-203ENST00000550413 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
AMIGO2-203ENST00000550413 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
AMIGO2-203ENST00000550413 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
AMIGO2-203ENST00000550413 CUX2O14529 1486 aa16.65■□□□□ 0.26
AMIGO2-203ENST00000550413 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
AMIGO2-203ENST00000550413 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
AMIGO2-203ENST00000550413 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
AMIGO2-203ENST00000550413 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
AMIGO2-203ENST00000550413 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
AMIGO2-203ENST00000550413 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
AMIGO2-203ENST00000550413 CUX1P39880 1505 aa16.51■□□□□ 0.23
AMIGO2-203ENST00000550413 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
AMIGO2-203ENST00000550413 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
AMIGO2-203ENST00000550413 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
AMIGO2-203ENST00000550413 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
AMIGO2-203ENST00000550413 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
AMIGO2-203ENST00000550413 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
AMIGO2-203ENST00000550413 CFTRP13569 1480 aa16.41■□□□□ 0.22
AMIGO2-203ENST00000550413 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
AMIGO2-203ENST00000550413 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
AMIGO2-203ENST00000550413 TIAM1Q13009 1591 aa16.39■□□□□ 0.21
AMIGO2-203ENST00000550413 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
AMIGO2-203ENST00000550413 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
AMIGO2-203ENST00000550413 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
AMIGO2-203ENST00000550413 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
AMIGO2-203ENST00000550413 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms