Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCA5LO95447 AC016397.2-201ENST00000624848 1985 ntBASIC16.17■□□□□ 0.18
LCA5LO95447 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCA5LO95447 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 MST1P2-201ENST00000457982 2291 ntBASIC16.16■□□□□ 0.18
LCA5LO95447 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LCA5LO95447 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.16■□□□□ 0.18
LCA5LO95447 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.16■□□□□ 0.18
LCA5LO95447 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 SNHG9-202ENST00000564014 471 ntBASIC16.16■□□□□ 0.18
LCA5LO95447 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.16■□□□□ 0.18
LCA5LO95447 AC015911.4-201ENST00000588022 1070 ntBASIC16.16■□□□□ 0.18
LCA5LO95447 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 KRT8P14-201ENST00000414254 1442 ntBASIC16.16■□□□□ 0.18
LCA5LO95447 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCA5LO95447 CLK3P2-201ENST00000427566 1453 ntBASIC16.16■□□□□ 0.18
LCA5LO95447 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCA5LO95447 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LCA5LO95447 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 AC090505.1-201ENST00000430515 1834 ntBASIC16.15■□□□□ 0.18
LCA5LO95447 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LCA5LO95447 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LCA5LO95447 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.15■□□□□ 0.18
LCA5LO95447 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 AC092580.3-201ENST00000430932 139 ntBASIC16.15■□□□□ 0.18
LCA5LO95447 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.15■□□□□ 0.18
LCA5LO95447 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 MEIS3P1-201ENST00000495167 958 ntBASIC16.15■□□□□ 0.18
LCA5LO95447 AC026410.3-201ENST00000514280 936 ntBASIC16.15■□□□□ 0.18
LCA5LO95447 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 TIMM17BP1-201ENST00000545713 516 ntBASIC16.15■□□□□ 0.18
LCA5LO95447 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
LCA5LO95447 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.15■□□□□ 0.18
LCA5LO95447 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCA5LO95447 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LCA5LO95447 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LCA5LO95447 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.14■□□□□ 0.18
LCA5LO95447 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.14■□□□□ 0.18
LCA5LO95447 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms