Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.49□□□□□ -0.41
SSSCA1O60232 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
SSSCA1O60232 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.49□□□□□ -0.41
SSSCA1O60232 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 AC018845.2-201ENST00000568326 409 ntBASIC12.49□□□□□ -0.41
SSSCA1O60232 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.49□□□□□ -0.41
SSSCA1O60232 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.49□□□□□ -0.41
SSSCA1O60232 AL049840.3-201ENST00000602669 611 ntBASIC12.49□□□□□ -0.41
SSSCA1O60232 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 MIR7706-201ENST00000613747 67 ntBASIC12.49□□□□□ -0.41
SSSCA1O60232 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 AC089987.1-201ENST00000551654 2209 ntBASIC12.49□□□□□ -0.41
SSSCA1O60232 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSSCA1O60232 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.49□□□□□ -0.41
SSSCA1O60232 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSSCA1O60232 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC012508.2-201ENST00000567613 1472 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 HLA-H-201ENST00000383620 1096 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC142381.1-201ENST00000426099 345 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.48□□□□□ -0.41
SSSCA1O60232 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC112191.1-201ENST00000523689 701 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 AC012313.10-201ENST00000623509 926 ntBASIC12.48□□□□□ -0.41
SSSCA1O60232 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
SSSCA1O60232 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.48□□□□□ -0.41
SSSCA1O60232 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSSCA1O60232 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
SSSCA1O60232 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms