Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA1Q9UND3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 LINC00554-201ENST00000564841 3011 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AC092933.1-201ENST00000393644 945 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 BRWD1P1-201ENST00000401091 371 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 FAM21FP-201ENST00000426241 1131 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AC016694.1-201ENST00000434179 700 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AL583810.1-201ENST00000553344 1045 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 MIR4538-201ENST00000581377 78 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 DBET-201ENST00000630918 3363 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 AC144831.1-201ENST00000573312 2656 ntBASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA1Q9UND3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 DRD5P1-201ENST00000456605 1438 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AC067750.1-201ENST00000608826 6545 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 FO681548.1-201ENST00000455617 1132 ntBASIC14.1□□□□□ -0.15
NPIPA1Q9UND3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms