Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PRYP6-201ENST00000514804 343 ntBASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 OR7E47P-204ENST00000575924 449 ntBASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 AC130686.1-201ENST00000622936 2466 ntBASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 AC019294.4-201ENST00000561777 2905 ntBASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM3Q9BZL3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AC073621.1-201ENST00000392730 636 ntBASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 RPL5P21-201ENST00000404620 815 ntBASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SCARNA2-201ENST00000458748 420 ntBASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 AC107918.4-202ENST00000641623 219 ntBASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
SMIM3Q9BZL3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms